Chrysanthenum transcriptome database

Information for unigene UN94724

FASTA Sequence
Unigene ID: UN94724Length: 3046 SSR
AGAGATGCAACGCAAAAGCAAGTAAAGTCTGGTACAAAAGCAAAGAATATCATTGCTACACATTTAAAAACGAGACATGCTACCTA
TTTAGTCAATACAATAAACCGCTAAGTACTCAATCTCATATCTCTGAGAGCCCTGAAACTAGGTAACGACCCAACAAATTAGATGT
ACCCAGACCTGCTTGCAATACTCGGATGACGGGCCCGTCTACTGGACAAATTACTCCTCACTTTTATGTCTGCTAACAGATAATCT
ATCTAGAAATCATAATAAAACAAGTAGATCTGCATTTTCCAGACAAGAAAAAAATGCCATAGATTGGAAGGCACGTTATGGGTCAC
TGGCTCAATAGTAGGTGCCGTAGTAGGACTGAGGAGCAGCTGCTGCAGTAGCTTGCTGAGCTGGTGGCACTGCTGCAGGCTGCGCG
TAAGCTTGTTGTGGGACAGCCTGCTGAACTGGATATGAAGCAGGATAGGCACCATAAGCAGCTGTGGGGGCGGCTTGTGGAACAGA
CGTCGGGGCTTGTGGTTGGGCATAGCCACCTCCATAAGCATTGTATGTGCCGTAAGCAGCCTGTTGGGTATATGTTGCAGGCCATT
GTTGTCCTTGAGCCTGTGTAGCTTGTGGCCAAGACTGAGGCTGGACACCATAACCTGCCGGCCACTGGTTTTGGGTGCCCTGATAA
GCTGTCGGAGCAGCAGGTGAAATAGCACCTGTTTTAGCAAGTTTTGCTCTGTCTGAAACTAAATAACCATCCATCTGGCGCTTCTT
GGACTCTGAAGCACTCTTATGATGTAAAAAGAGCTTTGCATGCCTATTGTCCGCCTTCTTTATGGTCTGTGTGTCCCCAAAAAGAT
CTAAAAACTCTAAGAAAATGCTAGATAACTCTTCTCTCTCAGCATAACTAGCAGGACTCAAATTATCAGGACCAGGAGCTATGAAC
TTCTCAACCAGTGAATCTAGACGATCAATCTGTTTTGGTTGTGACTGAATTGATTCCATATGAATCAAAGCCTCTAAAAGTGGTTT
TGAGAGTTGATTACTCTCTAGGGCTTGATCTAGAACCTCCCTTGCTTTCTCAACCCTTCCCAAAACCAAGTACAAAAATCGAGAAT
ACTGTGCAAACAGAAGAGGCAATATCTGTGAATGTTCTTTTCCCTTCTCAATTGCAATTGTCTGTTCATACAAAGAGCAAGCGTCT
TCCGGATTCCCCAGCCTATGTTCCATGTTAGCATGCTTGATAATTGCTTCAAGCAGACCAGGAGAAATTTCAGAATGAACAAGCTG
ATAAGATGCACGAGCACCTGCAATATCTCCACCATGTTCTCTAAATCTGGCAGCAAAAAGGTGAATCTCGGGTTGTCTCTTAACAA
ACACCTGGGTAGCACGAGCAAGAGCATTTTCAGCAAGATCCATACTCCCACTAGCTTCCATACACAAAATGTAGCGAATCCAGTAC
TCGGGGTAGTTGGCACACGCAATTAGACATCTTTCATATAACTTGAAAACAAAAGAGATACTCCAATGGCAGAACAGGGAGGCCCC
TCAAAAATGATAAGAGGGACCCTCCTTGCATCACAGACAGATGATTAAGTAAGAACACACAAAATGAAAGTTTGAAGTACTTAGCC
TTATAGCAACCAAATGGGAGACCCATGCTTTATCCCGTTTAATTAGATGCTTCATCCAACCAGTTTAGCCGATAAATCATATGAGC
AGCAGATATTACTTAACTTATTGAAGTCGCCGCTTCCTTCGATAAAATCAAGATAGTTATGCCAATTTTCGAGTTCTGCTACATTA
AGTGGTCGAACATGAAAGTAAGGCCTCCTGATAGCAGTTTCAAAATCAATGATCTTAGAATCAAACTCTTTAGCTTTCTTATACAG
CTCTTCTCTAACGGCAATATAACTTTCCAACTCTTCAGCTTCTGTCAAGCCTGCAGTTACAGGTTTGTTGGATTGCTCTACCGCAT
TCGGGTTAACTTCCCCTTCAGTTTCTTCATTACTAACTTCCCCTTTAGCATTTGCTGCAGCTGAAACTTCCTCAGGAGTTTTCAAT
TCTGATAAAGGGCGACTGGCTACTAATTCCCTGAAACTGTTAAAATAGCGGTCCAACTGCTGATTAGGATGCTCCAATATGCGTGT
GTATATCATCGCAAGATTGGACCAATTTTGTTGCTGATACTCATATTCGATATATTTATCCCATAACGGGAAAGACAGGTAATCAG
TTCCAACATAAGCTAATCCCCGTTCAAATAGCCTCCTTACTGTCTCTGGATCTCCTGCATATGTACTTATGGCAAAAACACAATAG
TGCAGCCACATATCTACAGAATATGTTACTCCATTCACTGCGCGTTCATAGACCTCAACAACTTTGTCTATAAATCCCATGCGTGC
TTCATGATCAGCATACTTCTTCCAATAACCGTAACACAGTGGAAATTCAGCCAAAAAAGTATCATAAACCTTTCGGATCTTCAAAA
TATTATCCTCAGCTATTTTCTCAGTCTCTTCAATTAGAGCAGTCCAGCCATTAAAATCCAACGAATTGGCATTTACTATGTTCCAT
AACCGCTCTTCCTCAGGAGATAATGCAGCAACTACAGTACCGTCCTGCGGTTGGTTTGCAGATGCAGAATTATGGGTATCGTATGA
ACCGACGCCATTCTCGCTTACACTGGAGGGTATCACAGTTTTCCCATCATTGGCATCATTCCCATTCGCATTAACTTCCTCATGAC
CAGAATTTAAATCCGTACCCTCTGATTTTCCAGCAGCACCTGAACCATCCTCATGTGGGGTGGCATTGTCTACGTTCATAGCATCC
ATACCAGTAGACGGATTCTCCTGAACATCTGATGTCTGAGCAGCAACTGTTTCGTTATCGGCCATGGTCATAGATATAACTGATTT
ATCTTAAACTTTGTAGAGTGATAAACGGTGAATTAACAGAGATAGAGAGCGGCTGTTTGTGTGTGTGTGAAAAAATTGATGCCCTA
ACTATAAATAGTGGAAAATAGATTTGCGTTTTCTAC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI37185 unnamed protein product [Vitis vinifera]13083e-141
XP_002272685 PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]12545e-135
XP_002526546 Pre-mRNA-processing protein prp39, putative [Ricinus communis]12053e-129
XP_002303113 predicted protein [Populus trichocarpa]11344e-121
XP_002320608 predicted protein [Populus trichocarpa]11022e-117

Swiss-Prot top hits (Blast detail)Scoree value
O74970 Pre-mRNA-processing factor 394907e-048
Q86UA1 Pre-mRNA-processing factor 394834e-047
Q1JPZ7 Pre-mRNA-processing factor 394791e-046
Q4KLU2 Pre-mRNA-processing factor 394791e-046
Q8K2Z2 Pre-mRNA-processing factor 394503e-043

TrEMBL top hits (Blast detail)Scoree value
D7U368 Putative uncharacterized protein13083e-141
B9SKM7 Pre-mRNA-processing protein prp39, putative12053e-129
B9GRD6 Predicted protein11345e-121
B9IBC1 Predicted protein11022e-117
F4I448 Pre-mRNA-processing factor 3910557e-112

Arabidopsis top hits (Blast detail)Scoree value
AT1G04080.1 PRP39; binding10552e-114
AT1G04080.2 PRP39; binding10552e-114
AT5G46400.1 PRP39-26251e-064