Chrysanthenum transcriptome database

Information for unigene UN93929

FASTA Sequence
Unigene ID: UN93929Length: 3106 SSR
GCAATCAGAAACTCTACTTTGTCAGACGAGCATTAATTGAAATAAGCGTATACAAGTCCATGATATGTCATATAGCTTTATCGCCA
TCAGTTCATGAACAAAATACAAATCTAATTTGACGTTGTCACCATCAAACATAAAAAGCTTGAAAATATATCAAAAGCATCCACAA
GCTACATAGCCAACATGTGCCCGAGCATAAAACAAGATACAGCTTTCTCATCATCATAACCAAGTCCCCTCGCAACACGTATCTTC
AGGTACACGAACCCCATCTCTCATGGGCTAAACAACTCTTTTTTAACCACAAACAGACCCTTGTGTCTAGGCTTCTTCTCTGTAAT
CTGGATTCTCTTTTAAGATAACAAACCCTTCCAGAATAGGAGAGAGCGGAATATACTTCTCTGTTGCAAGTTCAGCCCTATCCCCA
GCAGCCAAGAGTACGGGGGTGGAATGAGTCTGGAACCCAGTGATAGTCTTGGGGCGACCTGCTTGACCCACGACATCAACGGCTTG
ACCTACCCGAACTGGTACCGCCAAAGGTTTCAAATTTTCGTCCACAGTCAGCAACATTCTTGGCTGCATAGCCAAAACTACAAAGT
AGAGGACATAGTGATATTTTCCCAAAATAATAGCTTTCATGTCAAGACACGAATGCAGCAATACCACAAGTCCAGCAAGGGCCGTC
GGAGATAGCAAGAATCGCTCTGAGTGGTAGGGATTAAGGGTCATCAAACCCTTTCCCATATGTACAAAACCTTGAGCAATTCGCAC
ACAAAAGAGAAGACTGGCTTCTTTGTAATAATAACTAGAAAGATTTCGGAGCATGCCAGCAATTCTAGCATTATTGGTTCCTGCTC
CTATCAGCCCCAAAGAGATGATTGCCGCCATAGCGACTTCTGAATCAGCATCATGGCTGAGTCGACTCAATGTATCCATAACGTGA
ACCTTTGGGTTTGAAATGCAGAGAAGACCAAGAGCCAAGGGAACTGCCTTTCTGATATTCTGCTCACCATACTGCAGAAGATGCTC
TAACGAACGAATTGCCATGTCAAGGCCTAGCTCCTCAGCCATTGCTACCATGGCTATACCCAGCACAGCTGGACCTTGAAAAGTTT
CACCCTTCTCAAGGTGTTGGGCACATTGACCAAGAAAGTGTTGAACCTTTAGAACATTTCCTGTTCCAGCATAGGCGCAAGATAAC
AGGGTCATATCACAATACTTTCTGATCTTTTCATTGAATGTCTTGGAGACCTCGGCAGTAGCCTCTACGCTATCCTGCTTCCCAAG
GTACAGAAGACCCAAACCAAGAGGCAGTAGTCTGGTGAGTGGCTCCCCCAAGTCTGACTCGCTTCGGTCCATGAGTGCAAAAATTA
TTGCCTGTGCAACCTCCTCGTTACAAGAACCAACATATACCAAACCTAGTGAAATTGCTGTGAACGCAATAACATCCAGTGGTGCT
TTAGGGTCTCCAAGAATGGGAGTCAGTTTGTCCCGGATCTGTTCATTCTGAGTGCCTGCATATGCAAGGCCAAGACCATTTATGGC
ACCAATTTTAACAGATGAATCTTCTTTATCCAGATAATCAGCAAGGAGTGCCAGGGCAGGATCACAATCATTCTTGATACCACAGT
TTACAATACCAACTCCTAACAATGCACCAGCTATGACATGATTATCATTGCTATGGAAGTACTTGTCAAGTTGGGCAAGACCAGTG
TCGACATCCCAGATATCAATCAATCCCAAACTTGCAGCAGCACTAGCTTTCCCATGCTCTTTGTTTTTGAAAAGCCAGTTTCCTGA
AGAACCTCCACTTGAAGCCTCTGAAGTGACTGTCATTAATTTATCCTGTCCAAAACCAGCATTCACAAACGCATTTACAAACGTAG
CTGCCAGGTTTTGCCTGGCTGAATCAACACTTGCTCCAGCACTTGCTCGACCATCAAGTAAATGTGCCTTGTAGATATCTTCAGGC
GATTTGGGCTCCATAACTTCGATATCCCTTGCAAGGGTAAGATATCCTTCGCTTAGTTTAGTATTGTTGATAATCTCTTGCAAGGC
CTCCCTGTCATCGTCGTCGGCGCAAACATCTTCATCAAATTCAAAACTTACACCCTGTCGGGCAAGAATGTAACAAAGCTGCTTCT
TCCCCAAAAGATCAGAGCAGGAAGTTAAAATGTGCTTCACATGCTGCATATTGTCAAGATAGAGCGCAATCTGAAGTGCATGTGGA
TAGTCTTCAAATTTCGTGTAAATTTGGTAGGCAATGTCCAAAACTGCCAGGTCATCTGGTCCAGGGAGGTATCTTGCAGAACTTGT
TAGGTACAAGCAGGTTCTTTTAGAATTTGTCTTGTCGACGTGCTTCGCTAGTAAATCAAGATCTTCAACCTCCATCAAGAGATCTA
CAGCCTCAGGTTCAGCATTATGCTTCATGTGAAATGCAACAATTTGTTCCACAAGCTCTATTAGATCATCTACCTTTGCTTCCTCA
TTCACTCTTTTCGCATAATCTTGTGCGATTTCACCGGCCAAATTCCTAACATACTCATGACCCCAGGAACCGATATCACCTTTAGA
ACCCAACATTCGGTACTTCAAACTCTCCGGTTCACCATCAGCAGACATTGTCAAAGCCAAAACAGAAAGGATATCTGCAAGCAATT
TCTTTAAATCCGACTCTGGCATCGACTCGTAGAAAGATTTCAAAGTACCATAATGTGGGCGCAAAAACTTCAATGGCTTCGGGACT
GAAGTCATAGAACTCGTTGAAGTCCTGATCTCTTGCCTCATGCTTTCAAGAGCAACTTTCTGCAAAGCAGGATCAGCATCTTGCGC
TCTTTCAACATAAAGTTCCAATTGTTGCTTCAACGCCAAATCCTCTTCAGAGAGATCTTCATCCTTCTTATCGTCTTTCTTCTTCT
GGTCTTTTGACGGAACCTTATCGTCCTTAGGGTTTGGGGTGGTGTTCTTGTTGTTGTTGTTGTTATGTTCAGGCTCCATTACTGAT
TGTTATTGTAAACCCTAGAATGAAATTGAAATTGGGATTGATTATGATGATGAAGATGAAGAGTGAATTGAATAAGTGATTGGGAA
ATATTTTTAT

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002277029 PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A [Vitis vinifera]34520.0
XP_002517858 26S proteasome regulatory subunit rpn1, putative [Ricinus communis]34210.0
XP_003539943 PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like [Glycine max]34010.0
XP_003527419 PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like [Glycine max]33940.0
XP_003607505 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]33920.0

Swiss-Prot top hits (Blast detail)Scoree value
Q9SIV2 26S proteasome non-ATPase regulatory subunit 2 1A32900.0
Q6XJG8 26S proteasome non-ATPase regulatory subunit 2 1B31990.0
Q7S8R8 26S proteasome regulatory subunit rpn-117434e-193
P87048 26S proteasome regulatory subunit rpn112641e-137
Q54BC6 26S proteasome non-ATPase regulatory subunit 211224e-121

TrEMBL top hits (Blast detail)Scoree value
E0CTI4 Putative uncharacterized protein34520.0
B9RVT9 26S proteasome regulatory subunit rpn1, putative34210.0
I1LS70 Uncharacterized protein34010.0
I1KEY6 Uncharacterized protein33940.0
G7JTX3 26S proteasome non-ATPase regulatory subunit33920.0

Arabidopsis top hits (Blast detail)Scoree value
AT2G20580.1 RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A); binding / enzyme regulator32900.0
AT4G28470.1 RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B); binding / enzyme regulator31990.0
AT4G08140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A); binding / enzyme regulator (TAIR:AT2G20580.1); Has 286 Blast hits to 286 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 87; Plants - 35; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).2541e-021