Chrysanthenum transcriptome database

Information for unigene UN86548

FASTA Sequence
Unigene ID: UN86548Length: 2735 SSR
CATTTCAGCAGTAGATTAAATTCTTCTTCCCTGGTTAGTTTATAATATTTTTACGATATAGAGTACGCTCGGACTACCTCAACAAT
GGGTGCCCGGCACAGGGGACATTTCCCTCCTCCACGAACCAACTCATTTGCACACTTTGAACACGTGCACATGTGGCCACATCTGT
ACAGAAGCGAATCAATTGTGCTATCACAACAAATACAACATGTCCCCTTTTTGACATGAACCCATTTGGATCCATCTTCAGAAGTT
GCGGCATCAACACCTTGTTCACCCCCTGCCCGATTCAAAGCAGCAGAAACTTCCTGTCTTACAGAACGCTGCAACTCAAGTTGCAT
GTCCATGCAAGCTTCGAGCATCCTCTGCATGTGACTCATGCCTTGCTGCAGTCTCGCCATATCCGCCCTCAAGTCATTAATCATCT
CCCACTCAAGTTCAGAGCGATGAATACTGTGACGAGACCAACTAGAATGAGACAAATCATGGTGCCAAATTGGTTGTGGTGGGGGT
ACTGGAGGAGATGGTAGAACCAGCGAAGGTCTACCAGTGGCTTCATGCTGGTTCACATTGTTTTCATCCCTATGCTGCTCGTGGCC
ACCCTCTGGTGAAGCTGGAGTAGGCAAGTTTCTGTGAAGATCCCAATCTATAGGGGCACGAGTTTGCCTTTCCACATATGATTGAA
TCAAATGATCCAAGCTCTCACGGAATCCACTTCGAAGAAGATTAGAAACACTTCTCCTGCTTAGAAGTTCTCTTAATTCCATGCTA
TACACATTATCATCATCTGGTGCCTGAAATCTGTTGCCTCGTCTAACAGGAACTGTACGCCGTGTCCTTGGAGGATCAGCAGGTCC
CTCAGACCAACTTTCGACAGGTTCCCGTGAGACAGATTCATGCCAAACATCACTCATTCCTCGTGAACTGGTTCCTACTCCACTCC
CTGAGGCTTCTTGCACCCAATCACTGCCAGAACTTTCTTGCCAATTATTATTAACGTCTTCTGAAGCTTCCCCTCTCCATTCATTG
AGCTCATCAGTAACTACCTGTTGCTGCCGACTTTCTCCTTCATCAACAGTTGTTTGCTGATTTGTTGTTTGAACAGCAGAACCACT
TCCCAAATTTCCTTCGTGATTTGCCTGATGACTGTTATTTTCCTGAACCAAAGATGGAGCTTGATTTTCATGTTCAATCTCCTGTG
ATGTGATGGCATGAGTCTCATCACTTCTTAAATTACTGTTGTTATTGTTAGATAAATCCTCAGATTGGCTGCTTACTTGACCACGA
ACAATGTTTTCTAGTCTGAACCGAAACCCTTCCCTCAGACCAGAGACGGTGTGACGCTGCCTCAGCTGGACTAACTCACTCGCTGC
CACCGACGGAAGCCTCTCCTCCTCCACGGGCCTTTCATTTCGTAAGAATCTGCCTCTTAGTAAGGACTGAATTCTGTTGCGGTGAG
CAAAATCGGAAACAGCACGATACTCCGTCAAGCCCTGGAGTTCCCTTTGACGTTCCCTCTCAACCCTCATAAGTAGATCAAGTAAA
GCTTGTCTCCCACGCAACCGTAGCATGTCCCTTCGGATATGCTCAGGCTGACCTTCATCATGTTCAACACCCGGATGATTGTGATT
CTGATCACGAACGGCTGCACCCTCTTCCCTATGACTGCCACGAGACCCTCTCTGCTGACTGGTCATTTGCACCCACTCCCTCACAA
TCCTAACCCGTTCACGCTCAGTTTCCCCAAGCCACTCGGCTCTATGAGTGCCGCTCCTATCGGCAACACTAGAAGAATTATCAGTG
ACACCCGTCTCCCTCCATCCACGAACTATATGCCTCACTCTCTCCCTCTCACTCTCAATATCACCCTCGTTTATATCAGGAGACTG
CTCACGACTAGAATTATCATTTTCACGAGTCTCGTAATCATTCTCACTCTCCGTAACATCCTCAATACTCCCTTGATTTTCACTTG
CTCGTCCTTCCGACATATTAGAATCGACACCCCTCTGCTGCCTGAGTCTTTCCCTAACCCTCTCTCTAGCACGGCTCAAAACATGT
TCATCCTCCAATTCCCTCCACATCTGCAAAATGGACGATGCGCGGGTACTACTCGGTCTCTCAACATTCCCCTGCCTCCTAGATGC
CGGAGACTGGGACTGATCAGACTCCCTCAGAAACGAAGAATCCAACATGGAAACCGTATGCAAGCCCGCAAGCGCCATCAACTCAT
TCTCCCTGTTCCTCCTCTCAATGGTGGTTATCATCTCCTGCGCTTGCCTGGCAGCCCACCTGGTCAAACTCCGTCTCCTGGAGGTC
TCCCCCTGATGAGCACCCCTCCTCCTCCTCCTCCTGACAAGCTGATCAGTCTCGCTCTCGTCGTCATCTTCTTCGTGACTAGAGGA
AGCGAAAGACATACAGTCATCCAAATGCCCCCTCATCATCAACTCCTCCAAACCCCTCTCGAAATCTGACCCATCCGAACACGCAT
CTGTAACACTATCAGGCTTATGCAACACTCCTGATTCAACATCTGTCATCATCTCAAATCAAAACCCTAACCCTAGCTTCATTTTC
GTCCAATTAAATCACGATCTACCATAATTCAAACTATAATTAACGGTTAATTTTGCCTATAGAACCTTTGGACCTAAATTATGGAA
ATGATAAAAGTGTTATTATATTTTCAATTGGGTTGTAAAAAAAAGATTTTTTATGTGTTTGATTGAGTG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_003638185 Protein neuralized [Medicago truncatula]16165e-177
XP_003536290 PREDICTED: uncharacterized protein LOC100784174 [Glycine max]16013e-175
CBI31379 unnamed protein product [Vitis vinifera]14598e-159
XP_002263930 PREDICTED: uncharacterized protein LOC100241098 [Vitis vinifera]10592e-112
NP_001063987 Os09g0570500 [Oryza sativa Japonica Group]8092e-083

Swiss-Prot top hits (Blast detail)Scoree value
P29503 Protein neuralized1681e-010
Q24746 Protein neuralized1681e-010
A8MQ27 E3 ubiquitin-protein ligase NEURL1B1529e-009
Q0MW30 E3 ubiquitin-protein ligase NEURL1B1474e-008
Q923S6 Neuralized-like protein 1A1331e-006

TrEMBL top hits (Blast detail)Scoree value
G8A1I5 Protein neuralized16165e-177
F4JWA1 RING/U-box domain-containing protein12232e-131
D7LXJ1 Protein binding protein12062e-129
F6HNA4 Putative uncharacterized protein10475e-111
I1LCN4 Uncharacterized protein9428e-099

Arabidopsis top hits (Blast detail)Scoree value
AT5G04460.1 protein binding / zinc ion binding12235e-134
AT2G27950.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT5G04460.1); Has 502 Blast hits to 402 proteins in 102 species: Archae - 0; Bacteria - 164; Metazoa - 106; Fungi - 26; Plants - 62; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).4206e-041
AT2G34920.1 EDA18 (embryo sac development arrest 18); protein binding / zinc ion binding2047e-016
AT1G30860.1 protein binding / zinc ion binding1993e-015
AT4G20160.1 LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT1G30860.1); Has 56595 Blast hits to 33217 proteins in 1313 species: Archae - 191; Bacteria - 4343; Metazoa - 25320; Fungi - 4691; Plants - 1995; Viruses - 268; Other Eukaryotes - 19787 (source: NCBI BLink).1251e-006