Chrysanthenum transcriptome database

Information for unigene UN85648

FASTA Sequence
Unigene ID: UN85648Length: 1675 SSR
ACCCACGTTCCGTGTTTACCCATATCGTATCCTTTACTTTAGATTACACACTTAACCAGTAAAAAAGCTATTCTTCTACTCCCAGC
ATTCGACACATATTATTCCATCCCATCCACAATCACGTACCTGTTTGTTCCTTATGATATGCTTGTTTCGATAGCAACACTGATAG
GCTTCCCCCGGCCCATGGAAAATCCTCTGGTGCCATCTGGCATGCGGGGCCCTGGAGGTTGTTTTCCGATAACTGGGTGTTCGTTG
TTGACGGAATTAGATGAAGGTGGTGTGACCACATGAGCCCCTCGGTTGTTGTGATTGTTATGATTGTTGTAATGGTTGTTGTGATG
GTTGTTGTACTGAGGTCGTCCACGTCCCTTGTTGCCTCTGCCACGATTGCGCCCTTTCTTTTGTCCACCCTCCTTTTCGTTTGAGT
GATCTTCCCCCTGTGCATGCTCATGTGACTGGACTTCAGATTGTTGGTGAGTGTCATCTAAGTGCTTCTCATTCGGTGAATGTTGC
TCTGACGTAGATGTGTCATCTTCTTTATGGACAGCTTCGTCTTCCTGACCGGCTTTCTTTCCACGTGCTTGAGCAGGTTTTGCCTG
GGACGGTCGTCTCAGTAAACGGACTTTCAAGCTATTTCTCCAGTTGCCCTCTTTGTTCAGTTCCAGAGCTGCTTTCTCAGCTAGCT
CAATGGTCTCATATTCCACAAAAGCATGCAGCTTATTACTGAAGTGCATCGCATCAGCTTTTGACGCGCCTCTTGATGCTGAAGTT
GCCCCGCCATTGGAAGCTTGTGGCTGGCAGGTACGGATTGTCTTTACACTCCCGACAGCCGAGAAAATTTTCATTAGGTTCTGATG
ACAGTGGTCCTCAGGCAAATTTTCAGCAACAATAATGCGCGACTGCAGCTCCTCCATGTCTGCCTCGGTCAGCGGATGCTGACGTT
TGACTTTCTTCCCATCTTCACTAACCACCAGCTTTCCAGAATTTCTTAGTATGGTAGCAAGCTGGGCATGACCGCTAACAAGGGCT
TTGATCTTCTTGAAAGAAACAACAACAGATATAGGCACATATCCTTCAGGGTCTTTGCTGATGAACCTCATTAAATGATCAGTGGT
TGCCAAATTTATGTCACTGAAATAATACTCCACCTGATTAATAATCTTCTGAGTAGACTCATCCTTCACCACCTCCCCCCCTTCTT
TCACCGCAACACTCGCCTCGACAAACCCCGTCCCTCCTCCTCCTCCTCCATTAAACACTCTCTGCTGATGGTGATGATGCTTATGA
ACAACAGCAGCATTCTGATGATGATGAAACTGCATCGCAACATGTGGATGTGGATGATGGATCGGGTTAAACACGTGTATAATCCC
CGGCGTGTTTTGCGGCGGCGAAATCACTAAACCTCCACCTCCTCCGGCGGCTGATGACGGCGAGACGACGGCGGAGGTTCTAGGGA
CGAATTCAGGTGCCTTGGCGTTGAGTTTACTTAAGGATCGTGTGAGTGATGGTTCTAGGGTTTGTGATGACGTGGCTTCTTGTGCC
ATGATGATGATAGAAGGATAGTTGGGGATCTGTTGTGTATATATAGTGATGACGTGGCAGATCGGATCCCCCTTAGGTAGGGCTTC
AGTGAAGAAGAAGAAGGAGGAGAAGGTTTTTTTTTTTTCCC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002275950 PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis vinifera]9254e-097
XP_002881943 hypothetical protein ARALYDRAFT_322062 [Arabidopsis lyrata subsp. lyrata]9112e-095
XP_002529112 lupus la ribonucleoprotein, putative [Ricinus communis]8852e-092
XP_003554803 PREDICTED: uncharacterized protein LOC100813426 isoform 1 [Glycine max]8502e-088
XP_003521844 PREDICTED: uncharacterized protein LOC100801679 isoform 1 [Glycine max]8332e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q8BN59 La-related protein 61615e-010
Q9BRS8 La-related protein 61606e-010
P40796 La protein homolog1598e-010

TrEMBL top hits (Blast detail)Scoree value
D7LKU6 Putative uncharacterized protein9112e-095
B9SSZ3 Lupus la ribonucleoprotein, putative8852e-092
I1NCU3 Uncharacterized protein8672e-090
I1NCU5 Uncharacterized protein8502e-088
D7T2M5 Putative uncharacterized protein8322e-086

Arabidopsis top hits (Blast detail)Scoree value
AT2G43970.2 La domain-containing protein8148e-087
AT2G43970.1 La domain-containing protein7969e-085
AT5G46250.1 RNA recognition motif (RRM)-containing protein4349e-043
AT5G46250.2 RNA recognition motif (RRM)-containing protein4303e-042
AT5G46250.3 RNA recognition motif (RRM)-containing protein4267e-042