Chrysanthenum transcriptome database

Information for unigene UN71566

FASTA Sequence
Unigene ID: UN71566Length: 2091 SSR
ACTGAACTTCTTCTCGAGCTCCCTAACAAGCTTGGTATGGATCTTGCGGAACGGTTTCCTCAATCTGTATGGAACATGGACCACAA
CCGCCTTTTTGTTTCCAGAGATATCAATTTGATTTGCAGAGTTGATGTACAAGTCCTTCAAGTCACTCTTGAGCTCTTGGTGTGTG
TTCTCCAAGTCAAACAATGCCTGAGCAACGCTCTGCTCAAACTCAGTGGGCTCGACATCCTTGTCCTTTTGGATCTTCTTCATTGA
GGTATACATCTTGAAGATGAATTCCTAAAGAGCTTGGAGTTCAGTTCGGGACGATGAGAAGGCTGCTGCTGCTGCTGCTGCTGTTG
TTGTTGCTGAGGTGGTACGTTTAGAGGTTGAGAGTTGTAGTGCGTAAAAGGCTGAGAGTATAGTGGATTCATCACACCCTGTGTAT
GAAGGGAGGTGGCGGTGGCACCACTGAAGTGGCTCTGGGAAGATTCGTCTTGTGATGGATCCTTAAATCCGACCTGTGTAAACAAG
CCTTGTGAACCATGACCCATGTAGTCCTGAGACATAAAATCGTTTCCAGCACCAAAACGTGAAAATCCAGCTTGGGAATTATGATT
CAAAAAGCTACCTGGATACCCAGCTTGGGTCGCAGGAGTAGCATAGTCAACAGCATATCCACCTTGGGAAGCCTGTGTGGAAAGAT
CACCAACGTTATACTGAACATGTGATCCTTGGCTTTTAAAATCATCACCTAAGAAATCCTGTGACATGCCCCCAACAGAAAACCCA
TCACGATATGTCTGGCTTGCCCCTTGAGTCATATTAGAAACAAATCCAGGCTGTGATAATGGACCACCCGGGGATGGCTGGCTATT
TGGAGTTTCCATTGAAGGGAAGTTAAAGTTGGATCCCATGCCAGCACCTATCGGTTGCTGTTGCTGGTGTGGAAGATGACCAGCAT
TACCCCTCCCAGCACTGAAACCCCGACTCCCTGGCTGAGGAACATGAGGAATACCTCCAACGGGTCCATGTATAGCTCCACGTGTA
GGTATGGCATAAGGCTGAGGCCCGCCATGATAAGGTGGGATAGGCACACGGGGCATGGGATACGCAGCAGGATGCAGACCAGGTTT
ATGAGTACCATTAGGAGGGCCAGAAGGCATGTACGAACCTCTAGAACGACTGTCTCTTCTATCAGCGCCTGCATTTGCTGAGGCAG
CGGATCCAAAGCTGTCGTTAGGTACAATACCAGGCCCACCACCAAAGTAAAACCTTCGATCATTGTACATTTTTTTTGGCTTTTGA
AATTGAACCATGCTCTGCTTCAAGTTGTTTAGAGGTCCTTCCACCAAACATTCATGCTCCTTATAGTGTGTGAGTAAGCCATTCCA
TAAGGGCTGTTTGCTAAGTACTTTAGGATTTCCAAGAATGACAATACCATACCGAGCACGAGTAAGTGCAACATTAAGCCTGCGTG
GATCATTCAGAAACCCAATACCCTGATGTTCATTACTTCTGACACATGACAAAATAATGTAATCTTTTTCCCTCCCTTGGAAAGAA
TCGACACTCGCAACCTCAATATCCTTGTAAAGCTGCTGCCTAAGTGCACCGTTTCTAGACATGTAGTTAACGATGTATGCACGCTG
GCCTTCATATGGAGTTATAACCCCAATCTGACTTGGAACTACACCACTCCTTAAGAAAGTGGTCACCAGTTATTCAACATTTGCAG
CCTCTGTCCTATTAAGATAGGACGTTCCACTAGCACTGATTTCTTCTTGTCCCATCTGAACATAAAAGAACATGGGACGGTTTGGC
ACAGACCATGGAAAAATAATGCTTGTTGTTTGCCTTTCATTTACAGTCGCAACATTTTGGAGAGTCCCTTCATAGAAAACACAATC
CTATACTAGATTTTTAATTCGAAATCCTATACTAGCAAGTGGTATCAACTCTAATATCTACATTGAGCTAAAAATATGCAGTATTT
TTACCAAGGAAACCCTTTACCCAAAAAAATATGCAGTAAGCACAAAATGTAACTTACAAGTCAATGGTTAAGCTACATCATGAAAT
ATACCTGACCAAGTCTCAACCGATGGC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002279304 PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis vinifera]21211e-235
XP_002528794 nonsense-mediated mRNA decay protein, putative [Ricinus communis]20653e-229
ABK96558 unknown [Populus trichocarpa x Populus deltoides]20592e-228
XP_003611424 Regulator of nonsense transcripts-like protein [Medicago truncatula]20133e-223
EEC82084 hypothetical protein OsI_26082 [Oryza sativa Indica Group]18673e-206

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJR0 Regulator of nonsense transcripts 1 homolog17711e-196
Q9EPU0 Regulator of nonsense transcripts 17737e-081
Q92900 Regulator of nonsense transcripts 17711e-080
Q98TR3 Putative regulator of nonsense transcripts 17558e-079
Q9VYS3 Regulator of nonsense transcripts 1 homolog7396e-077

TrEMBL top hits (Blast detail)Scoree value
D7TTH5 Putative uncharacterized protein21211e-235
B9SS25 Nonsense-mediated mRNA decay protein, putative20653e-229
A9PJK5 Putative uncharacterized protein20592e-228
G7JYP8 Regulator of nonsense transcripts-like protein20134e-223
I1LGX2 Uncharacterized protein20035e-222

Arabidopsis top hits (Blast detail)Scoree value
AT5G47010.1 LBA1 (LOW-LEVEL BETA-AMYLASE 1); ATP binding / DNA binding / RNA helicase/ hydrolase17711e-197
AT3G02560.1 40S ribosomal protein S7 (RPS7B)3462e-032
AT3G02560.2 40S ribosomal protein S7 (RPS7B)3462e-032
AT5G16130.1 40S ribosomal protein S7 (RPS7C)3391e-031
AT1G48830.1 40S ribosomal protein S7 (RPS7A)3211e-029