Chrysanthenum transcriptome database

Information for unigene UN71565

FASTA Sequence
Unigene ID: UN71565Length: 2221 SSR
ACTGAACTTCTTCTCGAGCTCCCTAACAAGCTTGGTATGGATCTTGCGGAACGGTTTCCTCAATCTGTATGGAACATGGACCACAA
CCGCCTTTTTGTTTCCAGAGATATCAATTTGATTTGCAGAGTTGATGTACAAGTCCTTCAAGTCACTCTTGAGCTCTTGGTGTGTG
TTCTCCAAGTCAAACAATGCCTGAGCAACGCTCTGCTCAAACTCAGTGGGCTCGACATCCTTGTCCTTTTGGATCTTCTTCATTGA
GGTATACATCTTGAAGATGAATTCCTAAAGAGCTTGGAGTTCAGTTCGGGACGATGAGAAGGCTGCTGCTGCTGCTGCTGCTGTTG
TTGTTGCTGAGGTGGTACGTTTAGAGGTTGAGAGTTGTAGTGCGTAAAAGGCTGAGAGTATAGTGGATTCATCACACCCTGTGTAT
GAAGGGAGGTGGCGGTGGCACCACTGAAGTGGCTCTGGGAAGATTCGTCTTGTGATGGATCCTTAAATCCGACCTGTGTAAACAAG
CCTTGTGAACCATGACCCATGTAGTCCTGAGACATAAAATCGTTTCCAGCACCAAAACGTGAAAATCCAGCTTGGGAATTATGATT
CAAAAAGCTACCTGGATACCCAGCTTGGGTCGCAGGAGTAGCATAGTCAACAGCATATCCACCTTGGGAAGCCTGTGTGGAAAGAT
CACCAACGTTATACTGAACATGTGATCCTTGGCTTTTAAAATCATCACCTAAGAAATCCTGTGACATGCCCCCAACAGAAAACCCA
TCACGATATGTCTGGCTTGCCCCTTGAGTCATATTAGAAACAAATCCAGGCTGTGATAATGGACCACCCGGGGATGGCTGGCTATT
TGGAGTTTCCATTGAAGGGAAGTTAAAGTTGGATCCCATGCCAGCACCTATCGGTTGCTGTTGCTGGTGTGGAAGATGACCAGCAT
TACCCCTCCCAGCACTGAAACCCCGACTCCCTGGCTGAGGAACATGAGGAATACCTCCAACGGGTCCATGTATAGCTCCACGTGTA
GGTATGGCATAAGGCTGAGGCCCGCCATGATAAGGTGGGATAGGCACACGGGGCATGGGATACGCAGCAGGATGCAGACCAGGTTT
ATGAGTACCATTAGGAGGGCCAGAAGGCATGTACGAACCTCTAGAACGACTGTCTCTTCTATCAGCGCCTGCATTTGCTGAGGCAG
CGGATCCAAAGCTGTCGTTAGGTACAATACCAGGCCCACCACCAAAGTAAAACCTTCGATCATTGTACATTTTTTTTGGCTTTTGA
AATTGAACCATGCTCTGCTTCAAGTTGTTTAGAGGTCCTTCCACCAAACATTCATGCTCCTTATAGTGTGTGAGTAAGCCATTCCA
TAAGGGCTGTTTGCTAAGTACTTTAGGATTTCCAAGAATGACAATACCATACCGAGCACGAGTAAGTGCAACATTAAGCCTGCGTG
GATCATTCAGAAACCCAATACCCTGATGTTCATTACTTCTGACACATGACAAAATAATGTAATCTTTTTCCCTCCCTTGGAAAGAA
TCGACACTCGCAACCTCAATATCCTTGTAAAGCTGCTGCCTAAGTGCACCGTTTCTAGACATGTAGTTAACGATGTATGCACGCTG
GCCTTCATATGGAGTTATAACCCCAATCTGACTTGGAACTACACCACTCCTTAAGAAAGTGGTCACCAGTTATTCAACATTTGCAG
CCTCTGTCCTATTAAGATAGGACGTTCCACTAGCACTGATTTCTTCTTGTCCCATCTGCAATAAATTTACAAGAAAGCCGTCAACA
TAAGAATACATATGAATCTGTATATTTCTTACCAACCATTATGTTACTAGAAGAAAATTTTAATTTGCAAAAAAGAGCAGGCAGAA
GAGTTGCACACACCTGAACATAAAAGAACATGGGACGGTTTGGCACAGACCATGGAAAAATAATGCTTGTTGTTTGCCTTTCATTT
ACAGTCGCAACATTTTGGAGAGTCCCTTCATAGAAAACACAATCCTATACTAGATTTTTAATTCGAAATCCTATACTAGCAAGTGG
TATCAACTCTAATATCTACATTGAGCTAAAAATATGCAGTATTTTTACCAAGGAAACCCTTTACCCAAAAAAATATGCAGTAAGCA
CAAAATGTAACTTACAAGTCAATGGTTAAGCTACATCATGAAATATACCTGACCAAGTCTCAACCGATGGC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002279304 PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis vinifera]19695e-218
XP_002528794 nonsense-mediated mRNA decay protein, putative [Ricinus communis]19122e-211
ABK96558 unknown [Populus trichocarpa x Populus deltoides]19069e-211
XP_003611424 Regulator of nonsense transcripts-like protein [Medicago truncatula]18566e-205
EEC82084 hypothetical protein OsI_26082 [Oryza sativa Indica Group]17123e-188

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJR0 Regulator of nonsense transcripts 1 homolog16204e-179
Q9EPU0 Regulator of nonsense transcripts 16733e-069
Q92900 Regulator of nonsense transcripts 16715e-069
Q98TR3 Putative regulator of nonsense transcripts 16553e-067
Q9VYS3 Regulator of nonsense transcripts 1 homolog6545e-067

TrEMBL top hits (Blast detail)Scoree value
D7TTH5 Putative uncharacterized protein19695e-218
B9SS25 Nonsense-mediated mRNA decay protein, putative19122e-211
A9PJK5 Putative uncharacterized protein19061e-210
B9MTW9 Predicted protein18933e-209
G7JYP8 Regulator of nonsense transcripts-like protein18566e-205

Arabidopsis top hits (Blast detail)Scoree value
AT5G47010.1 LBA1 (LOW-LEVEL BETA-AMYLASE 1); ATP binding / DNA binding / RNA helicase/ hydrolase16204e-180
AT3G02560.1 40S ribosomal protein S7 (RPS7B)3462e-032
AT3G02560.2 40S ribosomal protein S7 (RPS7B)3462e-032
AT5G16130.1 40S ribosomal protein S7 (RPS7C)3391e-031
AT1G48830.1 40S ribosomal protein S7 (RPS7A)3212e-029