Chrysanthenum transcriptome database

Information for unigene UN66286

FASTA Sequence
Unigene ID: UN66286Length: 1795 SSR
GGTAGTACTTCAGGGGCAAACATAAAGAAAGAATAGTTATTAAGTTAACTGTTGCAACTTTACAAAGAGATGTTTAATTGGCTATT
CTTCATATACTTATGTACAAATATTGTCTGAAACTTTGTAATGTATCTTCATCATGTATTTTTAGTTTTGTCAATGCTCTCGTTTC
TATTCGGCGGATCCATTCTTTGCTTACACCATAGTAGCCCCCAATCTCCTCAAGTGTCTTGCGTTGGTAACCTTTGAGCCCAAATC
TTAAAATTAACACTGTCCTCTCCTTCGCAGTCAGATCATTCAGTCTGTTGTACATTTCACTGATCATATACTCCTTCATTAGAGTT
TCTTCAGGAGTCATCATTGTTAAATCAGGTGTACCTTCCCAAAACTTGGCATCAATGCCATTCCCAACAGTGCGATTTATGGAACC
AACAACTCTAAGGCATTTGGTAGCTGATTCAATCTTAGCCAACGAAAAACCTGTGAATTTGGATATCTCAGAGTCATCTGGGCATC
TTCCATCACCTTTATCTAGCGCTTTTCGAGCCTTTTGTATCTTGCTTATAGCCTTGCTCATTGTAAAAGGAATTCGTATCTCTCTG
GCATGACGGGATAGTAGCATTAGCAATGATTTCTTTATCCAATACTGTACATATGTCGAAAATTTATATCCTCTACTGCGGTCAAA
CCTTTCAGCTCCTTGAAGAACACCAACGTTTCCTGCCTGTATTAAATCTTTGAAGGCTATTCCTTGACCATTGTAGTTCTTTGCAA
GGTATATAACCAACGATCTTGTACTTCTCAGAAGCTCATCCCTGCAACACCAACCAAATTGCAAGTTTTCAAGCAACTCTTTCCTG
TCAACTCCAGCAGCTGCCGCCCAACTACTAAAACTAACCATGGAACCCGTTTCTTCTTCCAGCATTGTCCTAATCCTTTCCAAATT
AGCAACCATCTTAACTCCTCGTGATAGCTCTGCCTCATTCCTAGTAATTTTAACTCTTCCACGCTTAGTATTTGATGATCTTCTTG
AGGAGAGGTTGACCCGTCTTGAATTCTTATAGTTAGTTGCTTGCGGTTGAAATTCTACTGTACAAACACCATTAACCTTTTTTGAC
ATACGTTCTCTTTGTGACTTTCTTTCAACTTTTCTCGTAGAATGCACAATAGGCTTCTTGACGGTTTCTTCATTTATAGGACTAAC
TGATAATGGGTATTTGGATATTTCGGAAAAAGATGTACGAAGAAACTTCAAAGCACCAATCTTTTCTAGTTGAACCAATATGTTAC
GCTCTAACGATACCACATCTGAGTCAGCAAACGTATCTTCCAAAACAACAAGATTTTCCAACAGTAACCTATATTGTGATATCTTG
TTTGCTTGTAAGCTTGTAAGGAATGTTAATATATCGTCTTGTAACAAATAACCGACACTTCTCTGTACGTTGCTGGTTTCCGAGTA
ATCTGTGTCCAAGATCCGCGAAATAGAAGAACAAGGATTTACGCCACTAGGATCATTGTAGGAATTCTCACTTTCCATTGGGATAG
ATACTCTTGCCAAGTTATAATTGATGTCCTTGACTTTAAATGATGCACATGTTGTTGTTGAAGATGGCAAAGAAGAAGTGTTGGAA
GATATACGAGGTTGAAGTGTAAGACCCCATTTCAAGTTGAGCCTGAAACCCAAACCCATGGTGATGATTTTGCATTAAAAGATGAA
CAACTGTAAGATGATGATGATGATGATATACAGAATTGGTTTTGTTTGTGACATGAGATGTTGGCCACTGGTTTC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002516489 RNA polymerase sigma factor rpoD, putative [Ricinus communis]9765e-103
CAN83254 hypothetical protein VITISV_036980 [Vitis vinifera]9424e-099
XP_002275831 PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]9424e-099
XP_003551127 PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]9416e-099
XP_002308586 predicted protein [Populus trichocarpa]9121e-095

Swiss-Prot top hits (Blast detail)Scoree value
O24621 RNA polymerase sigma factor sigC9359e-100
O22056 RNA polymerase sigma factor sigB5594e-056
Q9LD95 RNA polymerase sigma factor sigF, chloroplastic4771e-046
P77994 RNA polymerase sigma factor rpoD3945e-037
P61540 RNA polymerase sigma factor rpoD3911e-036

TrEMBL top hits (Blast detail)Scoree value
B9RRX0 RNA polymerase sigma factor rpoD, putative9765e-103
E4MW42 mRNA, clone: RTFL01-07-G209452e-099
A5BHR4 Putative uncharacterized protein9425e-099
D7STK4 Putative uncharacterized protein9425e-099
I1MWA2 Uncharacterized protein9416e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G53920.1 SIGC (RNA POLYMERASE SIGMA-SUBUNIT C); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor9358e-101
AT1G08540.1 SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor5593e-057
AT2G36990.1 SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor4771e-047
AT5G13730.1 SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor3659e-035
AT1G64860.1 SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor2564e-022