Chrysanthenum transcriptome database

Information for unigene UN62290

FASTA Sequence
Unigene ID: UN62290Length: 1676 SSR
GTTCCAAGTAAAAACAGCTAATAAGGTGTGTTCATTGTAATTCAATAAGTTTGACTGGAAGCTTAAACATGAGATTCATAAGGCCA
AATCAAAATACAATGTACAAATCACAGTCACCTACTTACTCTCTAACACTAGATGATGGACATTCATTCTCCATAAACTTGTTTTA
AGGATTTTCAACATCTCTGCAGTCTCTTCTTTACAGTTCCTCTCCCCAAAACATTCCCCACCTTTTGGCACAGATCTGACAGACTG
ACGGTATATAATTATTACTATTGTCATTATTTCACTCTCTCATACAATGTACATGTAGCTACCACTAACTTGGCTTTGTCTTGTTT
CTTCATGTTTATTTTATTGATGACGGGCGACCAACTCCTCATGTAACCTACTGAACACTAGTTTTACAGGAATACAAGCAACTGCT
GCAGCTGCTGGTTTCATCACTCCCTCCTCTGCTCTTAAATCACTAATCTGATCTCCACCACCACCTATTGAAGACAAAGTTCTTAT
TTTTTGGCTGTGAGATAAAACGCTCCTCCTTTGTGGCTTTTTCTGGAGCTTTGGTGAAGGCCATTTTCTTGAAATGCTGCCCCCCT
TTCTATTATTATATTTTCTCTCTTCATCTGCTGCTGCATAGTCTTCATCTTGTGCTGGGGGCCGAGGAACCCTGCACTTGGCAGTC
CTCCTAGCAGTCCTCCATGGTTGAAGTGCTGTGTCATCAGGATCTAATACTAATGATTCTGTTTGGTACTCATAAGTTTCTGCTGC
AGAAAGAATGATATCAGATGAACCGTCTTGTATGGTTTCTACTGGGATAGGGTGACCTACTATTGCCTTGTCATTCAACTTGCTCA
TGAGTGAAATCATGGGAACATGTTCTCTCTGATAACCTGATTGGACTTGTACGTCAACATCAATCAACATCGACTTCATCCTCCCC
CCAAACTGAAGGCTGCTCATGTATGCAAGAGAAGAATCATGGTAATCGGTCGGCTGCTGCTCCCAGTATCCTTCCACAGAATTGAT
CATATCATGACTACTGTCTAACCCTACATCTCTAGTAGGCATATTAAATCCAATCGCTTGGCTTCTTAAACGTTTGTCAAATGAGT
CGGCAGCTAATCTATCCTCTCCCCCCCTGTAACTCATCCATTGGCTAGAACCCACCAACAACTTGTTATCACCTGCTGCATTACGA
TACCTCTTCATCAAAGATCGAGTGTTTCTCTTTCCTTTCAATTGCCATTTGGAGACAGTCACACTGGTCGGTAGGGATTCATCACT
TTCATCAGCATCACTCATGCTCTCATCTTCCCCTGTTTCAGATCTTCCAAATACTTTTGGTATAAATTCAATTTGGTCAGCATCAT
CTGAAAGTGTTGCATCATATGTGTCGGAACTGAGGGATTCTGTCCCAGAAGAATCAGTTTCAGTGTCTTGTTCTTCGTCTTCTTCA
TCATCATCATCATCAACATCATCTTCAGTAGTGTTGTTTTCTTCACTCAAGCCATATGTGAAGGCATTTTGAGACTTGGGGGTTGA
AACATCGACCCAGTCAGAGAGTGGTGTTTGGTTATAGTCAAAGCTTTCATCTGATTTAGGATGTTCCTTGTGGTCGAGTTGTAACT
GTTGCATTGATTGGTCCTCTGGTGACGGTTTCCTTTTCTCAC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAN77845 hypothetical protein VITISV_020829 [Vitis vinifera]2874e-023
XP_002274927 PREDICTED: uncharacterized protein LOC100254467 [Vitis vinifera]2848e-023
CBI26559 unnamed protein product [Vitis vinifera]2831e-022
XP_003607394 hypothetical protein MTR_4g077550 [Medicago truncatula]2686e-021
XP_002325377 predicted protein [Populus trichocarpa]2632e-020

Swiss-Prot top hits (Blast detail)Scoree value
B4KQU8 Ribosome biogenesis protein BOP1 homolog1249e-006

TrEMBL top hits (Blast detail)Scoree value
I1LP92 Uncharacterized protein3394e-029
A5AE26 Putative uncharacterized protein2874e-023
F6HEG8 Putative uncharacterized protein2848e-023
I1LIJ1 Uncharacterized protein2831e-022
I1ICW8 Uncharacterized protein2695e-021

Arabidopsis top hits (Blast detail)Scoree value
AT3G03140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21295.1); Has 422 Blast hits to 270 proteins in 77 species: Archae - 0; Bacteria - 12; Metazoa - 232; Fungi - 62; Plants - 66; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).1982e-015
AT3G21295.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51745.1); Has 428 Blast hits to 314 proteins in 77 species: Archae - 0; Bacteria - 111; Metazoa - 87; Fungi - 55; Plants - 63; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).1382e-008
AT1G51745.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21295.1); Has 414 Blast hits to 307 proteins in 88 species: Archae - 0; Bacteria - 106; Metazoa - 143; Fungi - 35; Plants - 61; Viruses - 3; Other Eukaryotes - 66 (source: NCBI BLink).1167e-006
AT1G51745.2 unknown protein1167e-006