Chrysanthenum transcriptome database

Information for unigene UN62059

FASTA Sequence
Unigene ID: UN62059Length: 1587 SSR
TTGATAAAAATGATCGAAGTCTTTTGGGGCTTTCTCTTCATTATAAAACACTCTTTAAAGCAGCACATGCATATTAACAATAGACT
GATTATATATGTAATAGTAAAACGTAGCTAACTGAAACTAAAGCACCATGCTATGATTGCACACCAGCAGTTGTAGGCTCTGTTAG
TGAGCCCAAAACACTCTCTCCGACTTCACTCTTACAGAGTGGGCACGAAGCATTGATCTTCAACCACTTGTCCACACAATCCTTAT
GAAAGAAGTGAGTGCATGGCAACTCCCTCAGTTCATCATTGTTTGCATACTTTGCCAGACAAATACAGCACACAGCATCTTCTCCA
GATACGACACGCTCTTTTTCGGTCCCAGCAGCCACAATGCCACCTTCACTAGCACCCGCTTGGCTTTCTTTACTGTTTCCGCGTTT
ATGTTTCTTAATCTTAAACTTGTAAGTAGGTAACGAATTAATAGACTCTGTAGTGGCTCCTCTATTTTGTGACATATCTTCCCTAA
ATCCTAGAACCGATATTATACAAGGGAGACAGCAGCAGATTGTGGCACATAAGATGAATGGCATTGCATACCCAATACAGCAGAAG
GTAAGAAACACTAGACATAACCTGTATAAGTTGGGAGCATCAGAAGCAGAAGTATGGCCTCCAAAAATCCACACGTTCCCAACAAC
AAACCAGACAGCAAAAAAGCAATCTAAGCCCATTTTGAAGTATTCAACCGGTACTTTGAGCCTTGCATACAGTAAAGCGGCTATTG
GTCTTGTTCTTGCAGTGGTGTTTTGAGTATCCGCTGCCAAAGAACTCGTTCCATTTGAAGACGAAGTAAAAGAGGTAGCTATAGCA
GAGATGCTGCTAGGAGCTGAACTCTGACGGGGCAACGACGGATCTTGATCAGTTGCGTGATTTCTAAAATAAAAACGCCAAAAAAG
CAACGGGAGAGTTGCAACACACCCAGAAGCATAACCAATAACCCAAGTAAATAACGGCGCGTGAGGTTGCTCATGCCTTGATAACG
ACAAAACAATAACGGCTGCAATTATCTGGCTCACGGTTATGACTAATTCTATAGATATCCAATAACCAGAATTCAACGGACTCCTA
CGAGTTGCATTGCCATTTCCCCTTCTAGTAATTGGTATATTTCTTGCATTTGTTCCATTGGTGGTCGAAAAAGCATGTTGAAAAAC
ACGATCAGTGACGCTAGTTGAAGGGAGATTTTCAACCTGTTGTGAGTTTAACCCGTTGACCGGTCTATCTTGGTCTATATCAATCA
CATGCGTACTGTTTTCGATGGCTTGTGATCGCTCCATTACTATTGAAAGCTTGTTTGTATGGATTTTACAATATAGTCCTAATACA
CAAACGCCCATCTAAATCCTCCACCAAAATAGCGAAGTAGTGAACACATGGAATAGAAATAGCAAAGAATGCTTTCAAAAGATTAA
ACGATACCCCTTGTCTTTTCCTGCCACACACTCAAATCAACGAGTTACGAGTGAAGAGTAACAAACAGATGACCAATTGTAAAGAA
TAAAGATCAATTGATATGATTTTACACACACACACATAA

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002516614 ring finger protein, putative [Ricinus communis]13019e-141
XP_002309588 predicted protein [Populus trichocarpa]12793e-138
CBI20932 unnamed protein product [Vitis vinifera]12694e-137
XP_002284536 PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis vinifera]12694e-137
XP_003545507 PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]11772e-126

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z92 E3 ubiquitin-protein ligase At4g116803722e-034
Q8LDB8 E3 ubiquitin-protein ligase At1g631703561e-032
Q9LN71 E3 ubiquitin-protein ligase At1g127603532e-032
Q8GUU2 E3 ubiquitin protein ligase RIE12994e-026
Q5SSZ7 E3 ubiquitin-protein ligase ZNRF31687e-011

TrEMBL top hits (Blast detail)Scoree value
B9RS95 Ring finger protein, putative13019e-141
B9H9P9 Predicted protein (Fragment)12793e-138
D7SUI3 Putative uncharacterized protein12695e-137
B9IKR5 Predicted protein12418e-134
F6HX40 Putative uncharacterized protein11745e-126

Arabidopsis top hits (Blast detail)Scoree value
AT4G32600.1 zinc finger (C3HC4-type RING finger) family protein11571e-126
AT1G80400.1 zinc finger (C3HC4-type RING finger) family protein10298e-112
AT4G11680.1 zinc finger (C3HC4-type RING finger) family protein3721e-035
AT1G63170.1 zinc finger (C3HC4-type RING finger) family protein3569e-034
AT1G12760.1 protein binding / ubiquitin-protein ligase/ zinc ion binding3532e-033