Chrysanthenum transcriptome database

Information for unigene UN61995

FASTA Sequence
Unigene ID: UN61995Length: 1795 SSR
ACCACTTTTGTTCATATTTTCAGATTGCCAATTAAATTGTTCATTGTAATTCTCTGTATATACAAAGTATTTGCATGAGAATGAAT
TTATCAATACCCTTTGGTATTTGTCTGTCAATATCACCGCCGCAAGTCAATCACATCAAACTCCAACTTTGGATTTATATATATGT
CTGTACATTGTTTATAAATTGGACTACCGTCGGAAGGTGCGTCATGCGAATGGAAACCCCTATGAGGGCAGTTTCTTATAACTCCC
ATACCACCAGGCGTTGTCAATCGGAAAATACCATGAGTTCTTGAACTGTCTCTTGGTGCCATGACGATTGCTATGGCTTCTGGCAG
CATAATCTGATATGCGTAGTGTGTATGAACATCGATAGATGACATGAAACAAGATTGTGTAGGATGTGTATGTATCCATCCAAGGG
GGAATAGTGATCGTTTGTCCTGTACTTCAAATATTTCCTCCTCATTGGTAGCCGAACACGAATTCTCTGTTGCTTCTTGCTTTGGA
ATGATGAGCGCTGTCACGTAGAACTTTCGGTTTTTAAGTGATCCGGCAAGGATGCCACATGTCTCTAAATTTTTGTTCGTATTTGA
TTTTGCCATCTTCATGAAATGATCCATCACTTTCGGTGAAATGTGCAACTCAAGGGGAGATTCAGCACAAACGACACCGTCAGTGG
AATTTACAGATCCCGGACCTGTATCATTTACCAGAGGAGATGTTGTAGGGAGCAAATCTTGGACCTCAGCTAGAACAGGAGGTGGG
GATGGCTGTCTTATAATATCCACTTGAGCAGGAGATTCTAGTTTATCTTCAAAGGAAATCAAGGAATCAGGTTCATCAACGTGTGG
TTGATTGTTGTTGTTTGGTAAAACAACTGATTCCAGACTTGATTTTTCATGTCCCAAGTCGTTAGTAACTTTTTCAACTGAAACGC
CATTCTCCAATAAAAGCGGCTTATTCTCCCTTGGGATTACCACAGGTGTCAAATCGATATTGCTTGGATATTGAACCGCATAATTG
ATGCTAGGGGCTTGCCACTGCCCACGAAGTCCATTTGGGCCCAGTATAGAATGTCTGGATAGACTTTCTTCAGTTGCACGTGGAAT
ATTTAGAGATAATCGCCTAGTTTGCTCTTCCATAGAGTTAGCAGGTGCATACATCTGCATCCGAGTATCTTGATATGCATACCCAT
GAGCATTAACTTGTGGTGCCTTATTGATGGTATAACTATTCATCGATGTTTGTGGCCTAACAGAATATTGATTCGGTAAAGATTTT
GACGGCTCCAACAATTTTGTTTGCGGGCGATTACTCCACCCATTTGATTGATATGAATGTTTTTTGGCTAGCTCATCAATCTTCTG
TCTTACAGTTGGCTTCAGCACTTCAAGCTCACTTGCAACATTCAATGATTTCTTTTTGAGAGAAATCTTATCTCTCTGAGGGGATG
CCCTATAATCTCGATGGAATGGTATTGTTTCTGTAGCCAAACTCAAAAATCTTAAAAGCATAATATAAAGATCAATAACATTCTTC
TCTGCTCGGAAGATGGCAGCCTGGCGGAGAATATTATCAGCGATCCGGTGATAATAGCGAAGCGATATGCGATTATCGACAGCTAT
CTTCTGTGCACTTGCAGCCACATTAATTGTTCCGTTGGATGATGATGATGATTTCATTGTGTTAGGGTTTCAATTTAGTTCTAATT
GGATCAAAATTAGTGAAATTAGGGTTTCGAATTTGGGGATATCTTTGAGGTTTATGATGATGTGAAGATGTAAAA

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002533700 amsh, putative [Ricinus communis]15912e-174
XP_003528952 PREDICTED: AMSH-like ubiquitin thiolesterase 1-like [Glycine max]15903e-174
XP_003534164 PREDICTED: AMSH-like ubiquitin thiolesterase 1-like [Glycine max]15894e-174
XP_002894133 mov34 family protein [Arabidopsis lyrata subsp. lyrata]14254e-155
XP_002278560 PREDICTED: AMSH-like ubiquitin thiolesterase 1 [Vitis vinifera]12283e-132

Swiss-Prot top hits (Blast detail)Scoree value
Q5PNU3 AMSH-like ubiquitin thioesterase 311392e-123
Q8VYB5 AMSH-like ubiquitin thioesterase 111267e-122
Q6NKP9 AMSH-like ubiquitin thioesterase 26169e-063
Q9P371 AMSH-like protease sst24412e-042
Q54Q40 Probable ubiquitin thioesterase DG10394322e-041

TrEMBL top hits (Blast detail)Scoree value
B9T631 Amsh, putative15913e-174
I1KIY6 Uncharacterized protein15903e-174
I1L4B5 Uncharacterized protein15894e-174
D7KD54 Mov34 family protein14255e-155
I1K5M0 Uncharacterized protein13118e-142

Arabidopsis top hits (Blast detail)Scoree value
AT4G16144.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: mov34 family protein (TAIR:AT1G48790.1); Has 622 Blast hits to 459 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 326; Fungi - 156; Plants - 82; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).11392e-124
AT1G48790.1 mov34 family protein11265e-123
AT1G10600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16144.1); Has 753 Blast hits to 752 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 359; Fungi - 199; Plants - 115; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).6167e-064
AT1G10600.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16144.1); Has 771 Blast hits to 770 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 366; Fungi - 201; Plants - 115; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).6014e-062
AT1G10600.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16144.1); Has 601 Blast hits to 601 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 140; Plants - 102; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).4482e-044