Chrysanthenum transcriptome database

Information for unigene UN61371

FASTA Sequence
Unigene ID: UN61371Length: 1054 SSR
GTAGAATGTCTAAAAGCATACTCTGAAACACACATTGCAAAATCCAAAATTGTTACATCTATATCTGTCTTGATTGTTTAGAATTG
AGGCCTCTGTCGAGCTTCGGCAACAGTGACTCTGATATTTCTACCATCAACGTTAAGGCCATCCAATGATTCAATAGCTTTGTTAA
CCTCATCGGCAGAACCATAAGTCACGAAACCAAAACCCTTTGATCTACCACTATCCCTATCGTAAACCACCCTAGCTTCCATAACA
TTTCCTTGCTCCTGAAACAAGGTTTCGAGGGCAAGGTTGTCCACACTCCATGCAAGGTTTCCGACATAAAGCTTGTTTGTGTCGTC
AGAACGCCTTCCACCACCACCACCATAGCCTCCACGGCTTCCTTCACTGCCATAGCTACTACGGCCTCCATCTCTTTGTCCTCTGA
AAGAAGACTCTCCTTTGGCTGGTGGTGGCCCTGAGTTTACCCTTAGTTGCCTTCCGTCAAGTTCATAGCCATTGAATTGGCGTGTA
GCAGCCTCAACTTCTTGGGCGGATGACATCGTCACGAAGCCAAAACCCCTGCTTCTTCCACTAATTTTGTCATATACAACCTCAAC
CATCTCAACATTGCCAGCACGTTGAAACAAACCAGCAAGAGCAGCACTATCAACACTAAAAGGCAAATTCCCCACAAATATCTTCA
AATCAGGGCTAAAACTCTGCTGCTCATCATCCCCAGATATCTCCTCACCATCATCATCAGCTAGCTCCAACCCAGATGACACAGCC
ACATTTCTCACAATCCTTGAACTGGGTGTTGGCTCAAACAGGTTTTTAGAGATGGGTTTTGAGTGGAGATGTGAAATGGGTTTGAA
TGAGGGGGTAAAAGTGAGGGATGAGGGGGCTGGGGTTTTAGTGACTGAAAATTGGGTTTTAGTGACTGAAGATAGGGTGAGGAAAT
GAAGAGATGTTGCTGATGAAGTCATTTTGGGTTTAAGGTGAAGAAGATAAGGTTTTGAGATATGTTTTTTTGAGGGTTTGTGTTTG
GGGTTTGGGATGGGGTTTATAT

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002281642 PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera]7442e-076
AAM66970 putative RNA-binding protein [Arabidopsis thaliana]6975e-071
NP_181259 ribonucleoprotein [Arabidopsis thaliana]6932e-070
XP_002881497 hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]6913e-070
P49314 RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP31; Flags: Precursor6797e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic6935e-072
P49314 31 kDa ribonucleoprotein, chloroplastic6792e-070
Q08937 29 kDa ribonucleoprotein B, chloroplastic6721e-069
Q08935 29 kDa ribonucleoprotein A, chloroplastic4175e-040
Q43349 29 kDa ribonucleoprotein, chloroplastic4078e-039

TrEMBL top hits (Blast detail)Scoree value
F6HR30 Putative uncharacterized protein7442e-076
Q8L941 Putative RNA-binding protein6976e-071
D7LJQ5 Putative uncharacterized protein6913e-070
Q8W214 Single-stranded DNA binding protein (Precursor)6644e-067
B9MTC6 Predicted protein6474e-065

Arabidopsis top hits (Blast detail)Scoree value
AT2G37220.1 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative6935e-073
AT3G53460.1 CP29; RNA binding / poly(U) binding4077e-040
AT3G53460.2 CP29; RNA binding / poly(U) binding4077e-040
AT4G24770.1 RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding2671e-023
AT5G50250.1 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative2402e-020