Chrysanthenum transcriptome database

Information for unigene UN58991

FASTA Sequence
Unigene ID: UN58991Length: 2537 SSR
GTTCAACATGTGATATTTAAGACGATTACAAGAAACTGGTGTTATCAATTGTTGGAATGACAGGAATTGAAGCACGGATGGTTGAG
AGCCAGATACCTAAGAGACAATTGTTTGATGATGGTTCGTGTGATATAACAGAAATACTAGCACACTATTTTGATTGAAAGAATTA
GCTCGGGGCGACCAGTTCCATAGGGAGTAAAAAGAATCAGCATAAAATGCTGAAAGTAAAAACAGTTGACAACCCTATATGATTAA
CAGTTAAAATCTTTCATCATTTTCCCAATCAGAATCCTCATCCTCGTCGTCATCTTCATCATCTTCAATATCATCGTCGGAATTCA
TCCATGAACTTTCATCTTCCCCCTCACTGTGTACTGAGACATGATCATGCAGCTCTATTTCCCCCGAGTTCCGAGCAATGACACCC
TTTGTATCTTCAAAACCACCATTTTCTGCTTTCATTTGCTTTATGGTGTTCTCCAACTCAGATACATGTTCCGTGAGAGCCTCGTA
TCTCTGCAAGGCCTTCCAACGTTTCAATGCCCTAGCTTTAGATGGAAGGCTTCTAGGCCTAATACTAATTGGCCTCTGATAATTCT
TTCCACGATAATACATGATGGCATAACCTTTAGGAACTTTTACAATGTCTATCAATATTCCGCCACTTTCATACTCCAAAAACCTT
GCTGTCTCTTCCACAAATTCAATATCTTTTTGCTTTGATATAAGTTTTACAAGTTCTCTATGTTTCCAGTGCAAATGCATGTTCTC
AATAACACCATCAAATACACCACGAATACCAAGTGGTAAGTAGGGTTTCATTCTTAAACCAAGTCTTCTGAACATAACACGTTCCT
CATCCGTAATTGTTTCCTGGTCTTCAGGAGCACCAGCAGGAAGCCAAGATTCTCGTATCTTAGCTAATTCTTTATCTGCTTTACTC
CTTTTAGACTGGGCGATAAATAATTTGTGCTCAAGTTTCTTAACAACTCTAGTTACTTTTGTTTTCGATGCTTCTTTTAACATCAT
CTCGTGTTCTTCACTTGTTTTTTCTCGTCCCCATTGTGCTTGAGCCTCATAAAATTCGGCCAGACTTCCTGCAAGTGCCACCTGTC
CATTCTCAACACTTGCAGCAGCTGGTTCTACTACTCCATACCGGACCTTCTCTTCTGCATCTTGTATATCTTTTGTCATCTCTTGT
CTTTCTACTAACGCAGTAGCTACACTGGTAGGAACGAAATCTTTCCCACGGTATATCACGATGTAATATTTGTTTCTCAGAAGTAG
GACACCTCCTGTTAGTTTCTTCAATTCCTCGGCCATTAACTCATTATTGGTATTTTGTATTCCACGTTTCACAGCAATTTTAGCAA
CCATGCTTTTCTCCCAAAGTTTGATTATTGCAGCTGCCAAGCCCTGATGATTCCTGTTTCGCCCAAGAGCAAAATGACAAGGAAGC
GATTTAGCAAGTTTTCTCAAATTTGTCATCTCGGCATTGGTCAACCGAGACCTCATTCCAGTAGGAAGAAGCCTAAAGGGAGTTTT
AAAGCCGGGAACTGTTTGAGGAAGTAAATCAGCATCTATTGGAAGTATTCCTGTGCCCCACCATTCATGAAACCGTGGACCTAACC
CATCCAGCACACTATTAAACTCAGTTTCCTCTTCCGTCATGGTGCGGTCTGCAAGAACCGGTGTTCTTGTTGCAATACTAGCTGTG
ACAGCATCACCTGTTCTTGTTATTAGATTACTATTGGCAGAGGAAACATCCGGAACAAAAAGGGCATCACCATCTTTTTCATTGGA
ACGAGGTCTTGATGAAGGGCCAGCATTATTGGCTCCCCTATACACCATCATCACACTTCCTGATTGCCATATGACTAATCCACCGG
TCCGGCGCTGAACAATCTCATGAGCAGTCTTCATATCACGCGCCAACACCTCGTGAAACTTCAACCTAACCAACTCAGACTTCCTC
CACTGATCATGAATCTTGTCAAGCACAGCCCCCGTAATCCCCGCTTTCGGTATACTAATCCTCTCCCTTAGCGTTGTACCAACCGT
CCTCAACCGTCTCAATTCACTATCCTCTAACGTCAATTCCGCCAAAGTCGGTGCTTTCGTCCTCTTCTTCACCACTTCCCCCTTGT
CTTGTTCTTGTTGAAATTCAACTTCTTTCTCCCATGGTAATACACTATCTTCCTCGTCATCGTCAATTAACATCCTATCGGGCCTA
ACCCAATCTCTCCTCAACAACTCACCTAGCTTCTCATCACCTCTCATAACAAAACTTTCGCCATTTTCGCCTTCGTTTTCGTCTTC
GTCGTCTGAGCCTAAACCTAAGTTACGCAGCCGGAGAACAATCCGGTCAATAGCCGTAGTTTTGGTAAAACTCGTGGTACTAGAAT
CAGGTGAGCGTTGTTTGAAACTAGGGTTAGGGTTAGGTGGTGCAGAAGATGATGAGGTGTTGGTTGTTGAATGTAATGGTTTGGTA
AAAGAGTGTTGTTTAAGATATGATGATGATGATGATGATGATG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI15459 unnamed protein product [Vitis vinifera]22009e-245
CAN72582 hypothetical protein VITISV_035294 [Vitis vinifera]21668e-241
XP_003533366 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max]21022e-233
XP_003530015 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max]20718e-230
XP_002317913 predicted protein [Populus trichocarpa]20153e-223

Swiss-Prot top hits (Blast detail)Scoree value
Q6YYA3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic10481e-112
Q9FYT6 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic9289e-099
Q9LF10 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic8705e-092
Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic2461e-019

TrEMBL top hits (Blast detail)Scoree value
D7SIZ8 Putative uncharacterized protein22009e-245
A5BQ84 Putative uncharacterized protein21668e-241
I1L4C3 Uncharacterized protein (Fragment)20791e-230
I1KIX7 Uncharacterized protein20719e-230
B9I2L6 Predicted protein20153e-223

Arabidopsis top hits (Blast detail)Scoree value
AT3G18390.1 EMB1865 (embryo defective 1865); RNA binding20255e-227
AT3G23070.1 RNA binding12182e-133
AT4G29750.1 RNA binding9377e-101
AT5G16180.1 CRS1 (ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1); RNA splicing factor, transesterification mechanism8704e-093
AT4G14510.1 RNA binding5792e-059