Chrysanthenum transcriptome database

Information for unigene UN56529

FASTA Sequence
Unigene ID: UN56529Length: 890 SSR
CAGAGTTCATCTTTACATTTTCTCAAAAATGTGAAATTGCAGCAAGCATATAATTGTATTCTTGCATCATATGGAAAGAAATCACA
CTAATTTTGATGTAAGCTAACATCACAATATTAACCTATGTTTCCTGTAAATTTTAAGCATTACAAATAACTTCGATAGGTACAGT
GCAAATAATTCAACTTCAGTCATTATGTCTGCGCCGTCGGAAATGCCTTAGGATAAAACTGTCTGCATATAAAGGATAGTTTTTCC
TAATCAAACCTTTTATGCATTTCCAATAGGAAAAATCGACCATTTCTCCATCTGTCCGGACAATGAACAAACATCTTGAGCTTTCA
AAATCTGGATGGTAACCAACCGTGATGTAACTAACGCCACATCCAATCTTCTTCTCACTCTCGGGATGATGTGGTAACAATCTCTC
TAGAATAGTTCTTTCATGTTCAGGACTTAACCTCTCACCACTTGCATATTTGCCAGAATGAAGAATCATCCTAACAAAACCAACTA
AAGGAACAGTATCTTCCAATATCTGATCCTCCCAATCAATCCACCCATCTTTCCTTCCATCATCATCATCATTACCATCATCATCA
TCCTCTTTCACCACAGGTTTCCGTAGCAAATCCGCAGCACCTCCTTCATACTGACCACCACCACTAGTAGTACTACTTCTCAGCCT
ATGCGGATATCGCAATTTTAAAGGAAATGAAACGAGTGAAAAATGTGAGTGGATAAGGTTTGTGTGGTGGAGGTTAAACTGTAATG
ATAATGACAATGATGTTGTTATTGATTCCATTTTTGTAAGAGTTTTTGAGTCTAGTGTTTGTGAAATCTAACTTTGTGCAGGATTC
CAAACCATTATTGTTGGTGTTAAGTTTTTT

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002282478 PREDICTED: protein DCL, chloroplastic [Vitis vinifera]5829e-058
NP_001233874 protein DCL, chloroplastic [Solanum lycopersicum]5801e-057
AFK33859 unknown [Lotus japonicus]5675e-056
XP_002326941 predicted protein [Populus trichocarpa]5641e-055
NP_001235676 uncharacterized protein LOC100527410 [Glycine max]5612e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q42463 Protein DCL, chloroplastic5805e-059
Q5D869 DNA-directed RNA polymerase E subunit 12543e-021

TrEMBL top hits (Blast detail)Scoree value
A5BA53 Putative uncharacterized protein5829e-058
I3S0R7 Uncharacterized protein5675e-056
B9MVR6 Predicted protein5641e-055
C6T490 Uncharacterized protein5612e-055
G7J6E2 Protein DCL5586e-055

Arabidopsis top hits (Blast detail)Scoree value
AT1G45230.1 defective chloroplasts and leaves protein-related / DCL protein-related5545e-057
AT1G45230.2 defective chloroplasts and leaves protein-related / DCL protein-related5464e-056
AT3G46630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: defective chloroplasts and leaves protein-related / DCL protein-related (TAIR:AT1G45230.1); Has 102 Blast hits to 102 proteins in 23 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).3261e-030
AT2G40030.1 NRPD1B; DNA binding / DNA-directed RNA polymerase2543e-022
AT1G63020.1 NRPD1A (NUCLEAR RNA POLYMERASE D 1A); DNA binding / DNA-directed RNA polymerase1154e-006