Chrysanthenum transcriptome database

Information for unigene UN56468

FASTA Sequence
Unigene ID: UN56468Length: 1352 SSR
TCCCTGCGTACAAGAGCTTCTTAAGATTCACGGCGTCGGCTAACCACAACGAATTCGAAAAATATCCATCTATTTAAAATCCTAGT
GTTACAGACAACATTTGAACTGTGTTGGAAAACAACATTTGACACAATTAAATTGATTACATACTCTATATTTACACATCTGACCC
CAATGTATATATAAATTTCACATACACATGTTTACATTACCCCCGAGACATTCTCTTTTTTGTTAACTACCAAGAGACCACAACCA
TGAGTCGGGGAGCAGTTATTCTGGGCTAAAATTCTTGAACTACTGACTAGTTATTTTATTAAACTGAGGCTGACGTGGCTGCTAAT
AAGAATCTATTAAACCGTTCTATTTTTGCTTGGTTATGTGATGATGATGATGATACGTCTCCTGGGACCTTTCTTCTTTTTCTTCT
CACACGGAAGAAGTAATCTTCTGTATCGAGAACATAAGATATCTTTGATGAGCTACAAGACATCTTATACTCCAACCCGTTGACCG
CGTGAGCATTTTCCATGGCAGCTGATGTAGCAGAAGATTCATCCATATTTGGAAATTTACATTTATTTCTCAGCATGAAAATGCCA
GATTGCTTTCTTGCAGGTACGATCGAAAGAAAATCATTATGTAGGTAAGATGCAAAATTAGGATCTACAGAAACTGCAACCACTTC
AGGCTTTTCATTCCCATCATCCATCAGCTGAATGGTCAGACGACATGGAACAGACGAACATTGAAATCTGTATATGTTCTCGTCAT
GAAGAAGAACATGCGCGTTTTCGTAGTAAACAGAATCAACAAATTTCTCGGGCTTTCTAGATTTTTCATACTCGTATAACTGAAGA
AGTTTGTTGTCCATCTCATCACCCACCACAGTTTGAAGCTGTTTGACGAGCTTATAGATCAACTTGTCCAAAGTAAATAACACATA
AGACTGATTTCCTAAAATGGCCCGGCAATCATCTTCAAATTTCGCATTGTCAGCAGATCCGTCGAGCAAATTGTACAGAGCACTTA
TAAATCTGGAGTACAGAACAGGAGGGCCAGTGTCCTTGGAAGTTCGACACTTCATTTCAGCTGATGTCGAGTTGAGTTTAGCGGAC
AATAGCCTGTCATATAACACTTGATGAAGCCTAAACAGGGTATAAAAGCTATCATTCCCATAAAACACATTCAAATCTTTTCTTTC
ACTGTCACATAAAGGCAAAGCTACATGTTTCGCCAACGGTTTTGCAGTTACTAGAAACTGCTCTGCTGGCAGTAAAGGTGTTCCAT
CGATACCAGCAAAATTAGCATCTTCTATCCCTTCAGCCTCTCCTTCACTTTCTGCTTTACCA

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI35015 unnamed protein product [Vitis vinifera]11691e-125
XP_002281791 PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis vinifera]11691e-125
CBI32068 unnamed protein product [Vitis vinifera]10652e-113
XP_002267856 PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis vinifera]10652e-113
BAD44865 transcriptional co-repressor -like [Oryza sativa Japonica Group]10151e-107

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRH9 Paired amphipathic helix protein Sin3-like 19222e-098
O48686 Paired amphipathic helix protein Sin3-like 38666e-092
O04539 Paired amphipathic helix protein Sin3-like 48542e-090
Q9XIE1 Paired amphipathic helix protein Sin3-like 57672e-080
Q9LFQ3 Paired amphipathic helix protein Sin3-like 27422e-077

TrEMBL top hits (Blast detail)Scoree value
F6HV63 Putative uncharacterized protein11692e-125
F6HPJ0 Putative uncharacterized protein10652e-113
B9S2H7 Putative uncharacterized protein10293e-109
B9HU88 SIN3 component, histone deacetylase complex10274e-109
B7F7C1 cDNA clone:J033007H10, full insert sequence10151e-107

Arabidopsis top hits (Blast detail)Scoree value
AT3G01320.1 SNL1 (SIN3-LIKE 1)9284e-100
AT1G24190.1 SNL3 (SIN3-LIKE 3); transcription repressor8665e-093
AT1G70060.1 SNL4 (SIN3-LIKE 4)8541e-091
AT1G59890.1 SNL5 (SIN3-LIKE 5)7672e-081
AT5G15020.1 SNL2 (SIN3-LIKE 2)7421e-078