Chrysanthenum transcriptome database

Information for unigene UN54588

FASTA Sequence
Unigene ID: UN54588Length: 1151 SSR
AGACATACATTCACAAACTAAATTTGGTTTTTGTATAGAAAAAACTAAAGCAATCTTGTTCCTCTATAATTTCAATATATAGATTG
TTCTAAACAGAGGGGAAAATATATAATGCAACATATGTGTGTTTCAGCAGAGTCTTGCACAATGATTGAGACGATAAAATGAACCA
AGCCTTTGAAGAAGTGAGCTTTTTATGGCGACAGCACGAGTACCTGCTCAGGAATTTGAGATTAAACTTGTTTAGCTCTGTTTTGA
CTTCACCCACTCGACGAAGTTATCTAGGATTAAAGGCCAAGCAAGTTCCTCGTCATAATTGTTGAAATCTGGAAAACTTATCTCAT
GGCAGAATCTATAGAACCCCATCCATTGATCCATATTTATGACCTTGTAATCAATCTGTGTCTTTAAATACTGGATGAACATATCC
ACCTGCTGATGATACTGTGAGCCCAAAACAAGCTCCAATAATTCACATATGCTTTCAATATCTATGCTCTTTTGTTTCTCCTCTGT
TAGGCAATATCGAAATGCATAAGAATAGAAGTCCACATAATTTGATGGCCTACGGACCTCGTTCTCCAGCTCAGGAAGCGCCTTCT
TTAACTTAGCTATAGTATCTGCCCGTAAGGCTTTAAGACCTTTCCGCCACTCCTCCAGCGTGAAGTATCCCTGCTTTTCAGCCTGC
ATTTTCCAAGCAAGCATCAATATACGGACATCCGTATGTTCGACTTCTAGGTCAGAACAGAGATACTCTATTCCTTCTGGGTCAAT
CATACCAGAAGACTCATTCGCATATGTATAGTATAGCTGATCAATACGCTCCAACTCCTTGGTTGCAGCTTTACCTGTAGCAGAGC
GAAATAGATCCATAGGAGAAGAATTAGAGGAAGAAGTTGATGGGGCTTTCTTTGATGAACCCCGTCGCATCCTCAACTTATTCTAT
CTTTTTATTTATTACAACAACAACATATGACGTCGATGTCCGACAGCGATTGAAGATGACCGGAAGTGAGTCAGAGATTGGTTGGA
TACGATACGATGGTCGGTCGGTTGGAGTAGAGACTATCCAACCCTCAAACTCTCTCTGACTCTGATGATGATGATGATGTTGAGAT
AGTTTGATACATGGATCTCTTTGTTACTACTAC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002273365 PREDICTED: DCN1-like protein 4 isoform 1 [Vitis vinifera]9352e-098
XP_002303837 predicted protein [Populus trichocarpa]9271e-097
XP_002527318 Defective in cullin neddylation protein, putative [Ricinus communis]9144e-096
XP_003632772 PREDICTED: DCN1-like protein 4 isoform 2 [Vitis vinifera]9135e-096
XP_002299268 predicted protein [Populus trichocarpa]9119e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q92564 DCN1-like protein 43674e-034
Q8CCA0 DCN1-like protein 43674e-034
Q9BTE7 DCN1-like protein 53522e-032
Q9CXV9 DCN1-like protein 53522e-032
Q5PPL2 DCN1-like protein 53522e-032

TrEMBL top hits (Blast detail)Scoree value
D7TZF8 Putative uncharacterized protein9352e-098
B9GVI7 Predicted protein9271e-097
B9SMU9 Defective in cullin neddylation protein, putative9144e-096
B9GMC8 Predicted protein9111e-095
I1KVJ3 Uncharacterized protein9101e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G15860.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 576 Blast hits to 576 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 403; Fungi - 78; Plants - 51; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).8692e-093
AT1G15860.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1).8692e-093
AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).2912e-026