Chrysanthenum transcriptome database

Information for unigene UN53043

FASTA Sequence
Unigene ID: UN53043Length: 1065 SSR
TCGCTCTCAGACCACAACACGATTTGGACACCTGTGTTCTGCTATTTTTTATTGTTTGAGCTTCATCTAATATCACCCTCGACCAA
CTCACCTTTGCAAGAGTACCACTATAATCAATGGAACCATCAATACCTATTTTGCCCTTCTTTTTCTTTCCACCCTTCTTTTTCTT
ATTAACAAATGCAGAACTCAACCCATATCTGTCACCATTTCTTGGATCCCCTTCATCTTCCTCGTCAAAAACTTTAGTCGGGACTT
CTTTTGCCACAATGGCATATGTTGTAAGGACGACATCATAACATGCCAGATCAGCAGGATCTTTGGTCCTATTTCCACCATGATAG
ACTAGAACATCAAGCTTAGCATCTTCGGAAACTTTCTCATCAAGCTCGCGGGCCCATTGTCTTAATACACTTGCGGGGCACACAAC
CAGGGATCCTGCTGCAGGTTTACGGTTACTAAACTGTTTTGATGAGCTACTGGCCTTAGTTACTAACTTCACGTCATCATCATCTC
CATCCTCTTTTTCTTCATCTACATTTACGGTGGCTTTGCCATCATTATCATCATCATCATCTAAATTCAAAGCTTCAGCTTTTGAA
TTTTGTGGATCATCTGAATTTGGTTTTGAAAAATGTTTCTGATACATAATCAGTGCAAGTGTTGAAATGGTCTTACCGAGACCCTG
GTCATCCGCTAAAATTCCACCAGAACAAGCCACACTAAGCTTTTCCTTGTTAACCATCCATGCCAACGCAATTTTCTGGTGCCTTA
GTAGAGAGACCGATAAAAGACCTTCAGGTAAATCTGCTTCAGTTAATTGAGTTTGATTAAGATCCTGTAATGCTGTTTGAAGAATA
AGCCTCTCATCACCAATAGATTGGTTATCAACAACTGGCCCAGGACGGTAAATATCAGACGGACCACCATATGGTGTAGGTGGAAC
CGACATAGGAGGCCTCAATGATGAAGGTAACATCCTACTTGCATGGCTTTTTTCCTTCGTTAAATCAATACTGACCTTTTTGTAAG
TACTTTCCAAATCAGCCTTTAAATTAGTTTGCC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002267403 PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like [Vitis vinifera]7746e-080
XP_002310362 chromatin remodeling complex subunit [Populus trichocarpa]7414e-076
XP_002513133 DNA repair helicase rad5,16, putative [Ricinus communis]7102e-072
XP_002891574 SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]6601e-066
NP_564568 SNF2 and helicase domain-containing protein [Arabidopsis thaliana]6591e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q9UNY4 Transcription termination factor 21748e-012
P34739 Transcription termination factor 21659e-011
Q9FIY7 Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 31452e-008
Q95216 Helicase-like transcription factor1416e-008
Q14527 Helicase-like transcription factor1399e-008

TrEMBL top hits (Blast detail)Scoree value
F6HVZ2 Putative uncharacterized protein7747e-080
B9HG87 Chromatin remodeling complex subunit7415e-076
B9RGI1 DNA repair helicase rad5,16, putative7102e-072
D7KFZ4 SNF2 domain-containing protein6601e-066
Q94BR5 Putative DNA-binding protein6591e-066

Arabidopsis top hits (Blast detail)Scoree value
AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein6594e-069
AT1G61140.1 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding5653e-058
AT1G61140.2 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / zinc ion binding5653e-058
AT1G61140.3 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding5653e-058
AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein3701e-035