Chrysanthenum transcriptome database

Information for unigene UN51939

FASTA Sequence
Unigene ID: UN51939Length: 561 SSR
TTCTTCCTCCTCCTCCTCCTCTTCAACCATCATCGCCGCTTCCTCCTGCTCCCGTTGCAACAATTTCTCCCTAATCCTCCTCCTCC
GCTCATCAACAGCATCCTCGTCATCCTCCTCAAACTCCAACCTCTCCAACCGCCTCTGCTCCTCTTCCTCAGTAGATATAATCTCC
GCTTGCCTAATCCGCCTATGATCCGCTCTAACCTCCTCCTTATTATCCAACCTATTCTCCGCCAATCTCCTTAACCTACGGTCATC
GCCTTTCACAATATTGGTCCTACCACCATCATCATCTCTACTCGGAAAAGCAGATTCTAACGCGGCTTTCGCCGTGCGAATATCGC
CGTCTTCGTCCCCATCGTCAGCCCATTCGGGCGCCTTACCGGGCCAATAACGCTTAACTTTAGTTTGGCCTATTTTTCCCCTAAGT
TTATCCCTAACTGCTATAACGGTATCGCTAACACCGGCTGTAACTGACATTGTAACGGATTTAACTAACTAACAGAAACCCTAATT
TTTTATAAATTATTACCTGTAAAAGATAATGAAATAATGAAATTG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAN78798 hypothetical protein VITISV_035471 [Vitis vinifera]4247e-040
XP_002275399 PREDICTED: microfibrillar-associated protein 1-like [Vitis vinifera]4211e-039
CBI17794 unnamed protein product [Vitis vinifera]4211e-039
XP_002325861 predicted protein [Populus trichocarpa]4174e-039
XP_002319725 predicted protein [Populus trichocarpa]4149e-039

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A5B9Z8 Putative uncharacterized protein4247e-040
F6GXD2 Putative uncharacterized protein4212e-039
B9IPU5 Predicted protein4175e-039
B9I640 Predicted protein4141e-038
I1K3R8 Uncharacterized protein4069e-038

Arabidopsis top hits (Blast detail)Scoree value
AT4G08580.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17900.1); Has 39042 Blast hits to 22601 proteins in 1140 species: Archae - 179; Bacteria - 2955; Metazoa - 18595; Fungi - 3264; Plants - 1100; Viruses - 245; Other Eukaryotes - 12704 (source: NCBI BLink).3581e-034
AT5G17900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08580.1); Has 36643 Blast hits to 21191 proteins in 1090 species: Archae - 183; Bacteria - 2726; Metazoa - 17629; Fungi - 3036; Plants - 994; Viruses - 215; Other Eukaryotes - 11860 (source: NCBI BLink).3518e-034