Chrysanthenum transcriptome database

Information for unigene UN49001

FASTA Sequence
Unigene ID: UN49001Length: 329 SSR
GCCTAGACTCGAAAGGAACACAAATACGCAACTGATCAACATCCGGCTTATCTCCGAAAACAGAGCGAAACTCGGACAAGCTCCTC
TCAACCTCAGAGTCATCAACAACACATCCCCTGTCTCTCAACATCTCCAAAACAGTCTTCCTAGCAAGATAGTACCTGTGAGACTC
CAATGCACCAGTGTCCCCTTTGGTCAAAATGCAGGTGTTGTTGTCACTGGGTTTTGGTGGGGTTATGTAACCGAGACCTGCACGTG
CCGCCATTGTTGAGTTGTTGTTTTTGAGGGTTTTGGAAATGTGTGTGTGTGTACGGAGGGAAATGGAATCA

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
NP_191013 RNA polymerase II fifth largest subunit, E [Arabidopsis thaliana]2183e-016
XP_002876255 eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis lyrata subsp. lyrata]2131e-015
XP_003625033 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Medicago truncatula]2067e-015
AFK43162 unknown [Medicago truncatula]2067e-015
XP_002297750 predicted protein [Populus trichocarpa]2032e-014

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M1H8 RNA polymerase 24kDa subunit-like protein2183e-016
D7LUU4 Eukaryotic rpb5 RNA polymerase subunit family protein2131e-015
A2Q2Z5 DNA-directed RNA polymerases I, II, and III subunit RPABC12067e-015
I3SSC0 Uncharacterized protein2067e-015
B9GM22 Predicted protein2032e-014

Arabidopsis top hits (Blast detail)Scoree value
AT3G54490.1 RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E); DNA binding / DNA-directed RNA polymerase2186e-019
AT3G57080.1 NRPE5; DNA binding / DNA-directed RNA polymerase1755e-014
AT2G41340.1 RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, D); DNA binding / DNA-directed RNA polymerase1631e-012