Chrysanthenum transcriptome database

Information for unigene UN46114

FASTA Sequence
Unigene ID: UN46114Length: 338 SSR
TTAAAGAAAGATACCAAGTCTTGCACTTGCTAATCACAACACATGAGATATGTAGTAGTAGTAGTATTAAACAAAGATACCAAGTC
TTGCACTTAGGATATGTATAAGGAGGTTGATAAGAAGAACACAGGGTCTGAAGTGTATGTAAACCATCACTGCCCCACACGACGGC
CTCTACCAGCACCATATCCCCCATGGCGGCCTCTACCAGAAGTAAATCCACTACCCTGGCCTCTAAAACCATAACCTCCGCCCCGA
CCATGTCCCCCATGGCGGCCTCTACCAGAAGTAAATCCACTACCCTGGCCTCTAAAACCATAACCTCCGCCCCGACCATG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_796892 PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform 2 [Strongylocentrotus purpuratus]1521e-008
XP_001958462 GF10932 [Drosophila ananassae]1512e-008
XP_003537882 PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine max]1466e-008
NP_896112 RNA recognition motif-containing protein [Synechococcus sp. WH 8102]1431e-007
XP_001702450 RNA helicase [Chlamydomonas reinhardtii]1431e-007

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZVE0 H/ACA ribonucleoprotein complex subunit 11452e-009
P35550 rRNA 2'-O-methyltransferase fibrillarin1391e-008
P22509 rRNA 2'-O-methyltransferase fibrillarin1391e-008
P0C5C7 Glycine-rich cell wall structural protein 21353e-008
A3C5A7 Glycine-rich cell wall structural protein 21353e-008

TrEMBL top hits (Blast detail)Scoree value
B3MAI1 GF109321512e-008
A8JGT1 RNA helicase1431e-007
Q7UA83 RNA-binding region RNP-1 (RNA recognition motif)1431e-007
H3F3E7 Uncharacterized protein1422e-007
I2JZ61 Protein component of the h aca snornp pseudouridylase complex1413e-007

Arabidopsis top hits (Blast detail)Scoree value
AT5G46730.2 glycine-rich protein1362e-009
AT1G31810.1 actin binding1272e-008
AT4G36230.1 unknown protein1272e-008
AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)1253e-008
AT5G35660.1 LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycine rich (InterPro:IPR010800).1244e-008