Chrysanthenum transcriptome database

Information for unigene UN45619

FASTA Sequence
Unigene ID: UN45619Length: 795 SSR
AAGTCAATTATCACTGACACTCACTTTCAGGTTCAATCTTAATAATAAGTAATAAACTATAGGACTACAAAGTATAGAGGATACCG
TCCGAACTTTAAAAGACAAGCACCATAAAATACAAAATCTCAATAACGCTTAAAAAAAATTAGTAAACAAAAAAACAACCATTAAG
GATAAATCAGGCATTACTCAGTAGAAAGTGTCTGCAGCTTCCTTAGTCGTTTGATGGCAGGTGAGGTGGTCTTCATCACCTTTCGA
ACCTTCTTCTTCTTCGCTCGTTTTCCTGCAGGTGGCATCTCTCTAATCGGACCAGGGGGTACTCCTTTCTTTAAAGCGCTACCTCG
AGGGGTACTAGAAGGTGGGATTCTTAGACTTTGTGGAGGTAACGGACTCTGCGGTTTCCAAACCAAATTATTCTTAATTGAAAATC
GAACTTTTTTCGCACTCTTTTCACCGCTTTTCATAGCAGTCCCTCCTTGTTCAGTTACATCAGTATTTTGAGACTCACGTGCATCA
GCACTCCTCACTCTCTTTCTCTTTTTGGGTTTAGTTACAGTAATTGTCGCTTCACTGTCTTTATCCAACCCCTCCTCATCAGCAAC
CTTCTCAAACTCCATCTGAAGATTCGACTTAAAAAGCTCGGTAAACGTAACATCATTCCCGTCACTAATTATCCCATTGTCCTTAA
CAACATTCCCATTTTCATTCTCTTTCATTTCACAATCTTGACTATCTGAACCCGAACCCTCCTTCACCGCCTTACTCTTCTTCTTC
TTCTTTTTCTTCGACTTCTTC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAN72961 hypothetical protein VITISV_016489 [Vitis vinifera]3452e-030
XP_002267225 PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]3443e-030
XP_002528509 nnp-1 protein, putative [Ricinus communis]3004e-025
XP_002318342 predicted protein [Populus trichocarpa]2833e-023
XP_003610521 Ribosomal RNA processing protein-like protein [Medicago truncatula]2791e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A5C227 Putative uncharacterized protein3452e-030
F6GXI5 Putative uncharacterized protein3443e-030
F2E265 Predicted protein3282e-028
F2E7X5 Predicted protein3282e-028
Q8S405 Similar to H. sapiens NNP-1 / Nop52 AP001752 (Score = 92; E= 9e-18)3282e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G20600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 444 Blast hits to 431 proteins in 151 species: Archae - 0; Bacteria - 10; Metazoa - 196; Fungi - 114; Plants - 27; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).2311e-019