Chrysanthenum transcriptome database

Information for unigene UN41714

FASTA Sequence
Unigene ID: UN41714Length: 1128 SSR
CACATGGCTCGTCCACATTTTCATGAATATGTGGACAATCTTCAAGAGACTCGTCAGGAAGTCTCAGATTTTTAATCTGTTTTACA
CACTCTTTTCCCATGTCTCCCTTGAGATCAATATACAAGCACCTACGTAGGTCAAGAGTTTCAAGATGACAACAGCCATCCAGAAT
CGCCTTCAGCCCAATATTGGACATACTGTTTCCAATGAGTTCAAGGTGCCTTAACGCAGGTAAAGTTTTCCCAATTGCTATGGCCA
TCTCATTCTGCCAAGTAATGGAGTCAACATCTTCAATGTAGAATCTATCGGCATTCTGATTCACTCTGAGGGTTTTTAGCAAAGGG
CAATAGCGACCAGCAGCTTCAATATCTTCTTCCGAGATTTCTGTAGTGTAAAGGCTGAGTTCTTCCAGCAAAGGAAATTTCTTCAA
AACATCACCCCAAGCTCCACAAATTTCACCAAAACAATAAATGATTTCTAGACGTGTAAGCTGACTTGATCTCTCAGCAACATACT
CGAGGAGCTCATAATCGACAAAATCCATAATAGTAAGATCAAGCAATTGGCCTTGGCTTCTATCGACAGCATGCTTACACATCTCT
CTAAGTGGAGGCCCTGTACATTGATCTCCATGATTGTCCATAGAAATGACCCTCCACATAGCAGGGTCCTTGCAGATTTTACGCCA
AGTAGTGCATACTTTCTGGGCATTTTCAAGTATATCATACACACCAACTCTGTAAAGTATATTGGCCATTATGTCCGAGGGGAGCT
CCAACCAGTTCCTAGTTGGTTGCTTCACCTGCCATCTCTGCTTGGGTTTCGGAACAAACTTGGATTTTTTAGCCTTTCGTCGTCGG
TTTGACTTTGATGTGGAGGGCATTTTCGCTTCAGCAGCAAGCCTGTCTCTGATACTTTGTTCACAATCGGTAAAATCCATGCCAAG
AAGTTTTCCCATCTTTATCATTTGAGTCACATCATCTTCTTCATTATCATCTGCTTCATAAACTTTATTCTTATTCTTATTCTTCT
TCTTCTTCTTATTCATCTCTTCAGCTTCCTTTTAATTGAATTTTTAGATGTGTTAAATGGGTATAAAAACCCTTATTTGTAAATCA
ATTTGAATTC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002874843 hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]6242e-062
XP_002274093 PREDICTED: F-box protein SKIP19 [Vitis vinifera]5694e-056
Q9S9V9 RecName: Full=Putative F-box/LRR-repeat protein 235524e-054
XP_002526604 ubiquitin-protein ligase, putative [Ricinus communis]5426e-053
XP_003593883 F-box protein SKIP19 [Medicago truncatula]5336e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q9S9V9 Putative F-box/LRR-repeat protein 235521e-055
Q9M0U6 Putative F-box/LRR-repeat protein 224921e-048
Q9M0U7 Putative F-box protein At4g054754841e-047
Q9M0U8 Putative F-box/LRR-repeat protein 214615e-045
Q9M0U9 F-box protein SKIP193461e-031

TrEMBL top hits (Blast detail)Scoree value
D7M2J8 Putative uncharacterized protein6242e-062
A5ALT6 Putative uncharacterized protein5694e-056
B9SKT5 Ubiquitin-protein ligase, putative5426e-053
G7IP49 F-box protein SKIP195336e-052
I1MF12 Uncharacterized protein5122e-049

Arabidopsis top hits (Blast detail)Scoree value
AT4G05490.1 F-box family protein (FBL22)4921e-049
AT4G05470.1 F-box family protein (FBL21)4849e-049
AT4G05460.1 F-box family protein (FBL20)3469e-033
AT4G03630.1 root nodule development protein-related3281e-030
AT5G52480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (FBL20) (TAIR:AT4G05460.1); Has 566 Blast hits to 531 proteins in 61 species: Archae - 0; Bacteria - 6; Metazoa - 200; Fungi - 34; Plants - 283; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).2671e-023