Chrysanthenum transcriptome database

Information for unigene UN27851

FASTA Sequence
Unigene ID: UN27851Length: 650 SSR
CCTGGTTTCTCATGACTTTCTGGACTCACCTGGTGTCAGACTTGTGGACTTAGTTACTCGCATAAAACGCACTGGTAAATTATAAC
ATTATATATTTTATTGAGTTATAACTCATTCACAACAAAACCAACCAATTCTTAACATACGACATTTTTGACCGACATAAACACAG
ACTTTAGCTCTCTAACCAACAAAACCTAAAAACAGACCCTAGCCACACTTGACAGAAAGCTGCCTGTAAGGATGGATGGTCCATGC
TTCACCGTTTAAGCCATGCCTCCACTTGTTGCGGTACGGATTATCTGGAACAAAGAGGATCCTATCACAACAAAGATGAAGAAACC
AAGCACAATAGGTCCCACAGGGTACGAGTCCTTTTTCTTAGTTGTGGTTTCAGGCACGGAACCACGCTTCTTGATGTTCTTCTCAA
ACCTCTCCACCTTTCTATCAGCCAACCGCTTGGAGGTAGTCATTGTAAGGATCTGATCTCTGAGAAGTAATTGAAAGAGGTTGTGG
TTTTGGAGATGTCTGACTCTTTCAGAAACCAGTGCCTGTGATTTAAATGGGGTTGCTGTTTTTTCTTAGATATATATATATGGTGG
TTTCTGGTTGGTGGTAGGTGTTTTTTTTACACGACACCGTTTTGTCGA

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI27668 unnamed protein product [Vitis vinifera]3048e-026
XP_002514902 stress associated endoplasmic reticulum protein, putative [Ricinus communis]3031e-025
ADB02897 membrane protein [Jatropha curcas]3021e-025
XP_002277156 PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Vitis vinifera]3002e-025
AAF99731 F17L21.12 [Arabidopsis thaliana]2984e-025

Swiss-Prot top hits (Blast detail)Scoree value
Q3T073 Stress-associated endoplasmic reticulum protein 21351e-007
Q8N6R1 Stress-associated endoplasmic reticulum protein 21351e-007
Q6TAW2 Stress-associated endoplasmic reticulum protein 21351e-007

TrEMBL top hits (Blast detail)Scoree value
B9RMD3 Stress associated endoplasmic reticulum protein, putative3031e-025
D6BQN4 Membrane protein3021e-025
F6HGB4 Putative uncharacterized protein3002e-025
Q9FZK2 F17L21.122984e-025
D7KBP0 Putative uncharacterized protein2967e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G27350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27330.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).2972e-027
AT1G27330.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27350.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).2972e-027