Chrysanthenum transcriptome database

Information for unigene UN24453

FASTA Sequence
Unigene ID: UN24453Length: 380 SSR
TGCACTTTTCTTGATCCCGCCAGACGGTTTGCAGTATGGTAGACTGTAGTAACTAAAGGGAAGCTCGGTTTCAATAGATGTTAAGG
AATTAACCTTGGCGAAAATTTTGTCACCGGGGGAGTATGTATGCATGTAGCTTCCAGGCAAATAAAACCCATTGCAAAGGTGTGAG
ATGAAAATTAGACAAGTGAAAAGAAGCGCGTAAGTCCCTCTTGAGATCAATGACAAAGCCATTGGTCTTAAGGAACACAAAACAGC
TCTATCAAGAGCTCCTCAGCCTAAGCCAGTCACGACTATCACAAAACCTGGATTAGTAGATCTGATAAGTGGACCGGAATGTAACC
GCCGGTGAGATTTATGATAGCTGGTGTGTGTGTGTG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAB40983 putative protein (fragment) [Arabidopsis thaliana]2953e-025
NP_193002 endomembrane family protein 70 [Arabidopsis thaliana]2953e-025
XP_002302834 predicted protein [Populus trichocarpa]2802e-023
EAZ07484 hypothetical protein OsI_29743 [Oryza sativa Indica Group]2693e-022
EAZ43207 hypothetical protein OsJ_27806 [Oryza sativa Japonica Group]2693e-022

Swiss-Prot top hits (Blast detail)Scoree value
Q55FP0 Putative phagocytic receptor 1a1391e-008
A5D7E2 Transmembrane 9 superfamily member 41165e-006
Q92544 Transmembrane 9 superfamily member 41165e-006
Q5RDY2 Transmembrane 9 superfamily member 41165e-006

TrEMBL top hits (Blast detail)Scoree value
F4JRE0 Endomembrane family protein 702953e-025
Q9SU20 Putative uncharacterized protein T20K18.10 (Fragment)2953e-025
B9GTF3 Predicted protein2802e-023
A2YWM3 Putative uncharacterized protein2693e-022
A3BUG8 Putative uncharacterized protein2693e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G12650.1 LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35160.1); Has 983 Blast hits to 980 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 434; Fungi - 144; Plants - 228; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink).2951e-027
AT2G24170.1 endomembrane protein 70, putative1642e-012
AT5G10840.1 endomembrane protein 70, putative1614e-012
AT5G25100.1 endomembrane protein 70, putative1588e-012
AT3G13772.1 endomembrane protein 70, putative1354e-009