Chrysanthenum transcriptome database

Information for unigene UN23806

FASTA Sequence
Unigene ID: UN23806Length: 465 SSR
TTCTGTGCATACTCATCCGCATATATTTCACCAAGACCTTTCTTACTCTGATTCTCATCCATTTCCTTCATTTCCCTAGGTGCTTT
AGAAGGTAAACTAGAAGCCCTTTCCGCATCATCAAATTGGCCCTCAGTTATCCGTTTCTTGATAAGTTCTTCAATAGACAGTGAAA
ACTCTTCTGTGATTACTGGTGGTGGGTTTGCATTTCGCTCCCAATCCAAATCAGCTTCTAAAGCACTATTCTTAGGTCTTTTCGTT
GCAGTGACCTCGCCCTGCATGGTCCATGATTTTGCTTCTAAATTCTCTTTCTCCACTTGCTCTATTTTGGCCCGTTGTTCCATCAT
CTGCTTTTCATGAGTAGAAAGATTGCCTTTTTTCGTCTCATCGTCAGATTCCATGTCCTCGTCCCCTGTTTCTGAATTCTCATTTT
CTTCTTCTTTCTCTTCTTCTTCTTCTTCCTCTTCT

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAN75325 hypothetical protein VITISV_003767 [Vitis vinifera]4541e-043
CBI15009 unnamed protein product [Vitis vinifera]4541e-043
XP_003634246 PREDICTED: uncharacterized protein LOC100241507 [Vitis vinifera]4541e-043
XP_002440108 hypothetical protein SORBIDRAFT_09g026144 [Sorghum bicolor]4468e-043
XP_002318058 predicted protein [Populus trichocarpa]4451e-042

Swiss-Prot top hits (Blast detail)Scoree value
P47083 U3 small nucleolar RNA-associated protein MPP102621e-022
O13910 U3 small nucleolar ribonucleoprotein protein mpp102503e-021
Q810V0 U3 small nucleolar ribonucleoprotein protein MPP102378e-020
O00566 U3 small nucleolar ribonucleoprotein protein MPP102342e-019

TrEMBL top hits (Blast detail)Scoree value
A5C5E1 Putative uncharacterized protein4541e-043
F6GSM4 Putative uncharacterized protein4541e-043
C5Z1E1 Putative uncharacterized protein Sb09g0261444469e-043
B9I3B9 Predicted protein4451e-042
C5X6V8 Putative uncharacterized protein Sb02g0312504451e-042

Arabidopsis top hits (Blast detail)Scoree value
AT5G66540.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 76240 Blast hits to 38667 proteins in 1479 species: Archae - 252; Bacteria - 6537; Metazoa - 31185; Fungi - 9935; Plants - 3937; Viruses - 750; Other Eukaryotes - 23644 (source: NCBI BLink).4091e-040