Chrysanthenum transcriptome database

Information for unigene UN11887

FASTA Sequence
Unigene ID: UN11887Length: 214 SSR
TTCAAGCTCCTCCACCGAAAACTCAACTTTAATATTCAAAAGCGGCCGAAACACATTCAAAAAATTTAGTATTGACGCAAGCTCCC
ACATAGCCCGAATCCGCCACCGCGGCACTTGCGACTCCTGGGGCGCCTCTCCAACCAAAGGAGTCACAACTTCCCAATTCGGATTC
GGCGGAGAGGGCGGCTGCTCCTCTTCTTCCTCCTCCTCCTCC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_003622384 Aminoacyl-tRNA synthetase [Medicago truncatula]2246e-017
XP_002463715 hypothetical protein SORBIDRAFT_01g004720 [Sorghum bicolor]2076e-015
XP_003525056 PREDICTED: uncharacterized protein LOC100795519 [Glycine max]2076e-015
BAE71190 aminoacyl-tRNA synthetase [Trifolium pratense]2041e-014
XP_002511495 tRNA ligase, putative [Ricinus communis]2041e-014

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
G7KR68 Aminoacyl-tRNA synthetase2247e-017
C5WX14 Putative uncharacterized protein Sb01g0047202077e-015
I1JZU0 Uncharacterized protein2077e-015
B9R920 tRNA ligase, putative2041e-014
F2EH55 Predicted protein (Fragment)2041e-014

Arabidopsis top hits (Blast detail)Scoree value
AT1G18950.1 aminoacyl-tRNA synthetase family1756e-014
AT5G25580.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: aminoacyl-tRNA synthetase family (TAIR:AT1G18950.1); Has 138 Blast hits to 138 proteins in 63 species: Archae - 0; Bacteria - 4; Metazoa - 48; Fungi - 29; Plants - 30; Viruses - 1; Other Eukaryotes - 26 (source: NCBI BLink).1084e-006