Chrysanthenum transcriptome database

Information for unigene UN09172

FASTA Sequence
Unigene ID: UN09172Length: 1946 SSR
TTTTTTTTGGCGAAAAGTATTCTCATTTTTGCGTAGTCATACATACCTTCAAAAAAAGGCAGTCAAGTTCAACTAGTACAACACTT
TCTATCATCGTTCCACAACATCCAACTCCATCATCTCATAACAGGAAAGGCATAAAAGCCCTGGAGTTGGAACCGTAAGTTAGGAG
CACGTTTTTATACAAACACAACATGGACTTTACAATTACAGCAGACCAGAATAATCAGACTGTATCTCATTCTCGTTTGTCTTCTG
CTAGATCCTCCGTCAGCCCAATAAGATGGTCGGTCGACCCAAGTCCTTTCTTTTCCTTCCTTTCCACCACCATACCAACTTCGCCA
CCCTCAACTTTTACTCCGGTTGTAAGCGATATGGCCTCTTCGTCATAGTCATCTCCTGTGTCCCCTCCATATGCATATCTAGTGGG
ATTGCGAGAAGGAGCCCAAAGAATGCATATAACTACCAAGAGAGAATAGGCAAGCAGTGACCAAAAAGCGGGAATAATCCAGTAGA
TACGCCATAGCTCACTTATCGGGTCAGTTGCATTGAAGTACAGCTCATAACCAATCCAAGCGATCGATAGGAGCACAAAAAGTGCC
AGGGCATTTGTGAACTTTCTATAAACCTCGAGTTTAGCAATGCTTCTCCGCATCTGAAGCTTCTCCAAAGTCTTGGATAACGATGA
GAATATCCACAGAATAAACCATGCATCCAGGAACGCAACAGGCAATACCAAATACAACTTGGTTTTGCCAGAAAAGTCATTAATGT
TTCCCAAGTTTTCAACAAGCTCAAGTGCCTCAGAAGCAACAAAGTATACAGCACCAAGAATCAGCACTTTTGAAGTTACACCACCA
AGTGTGGGTCTCACCACACCATAGCCCATCGAAACAACCAAAAGCAGTAACCGAGAAAGAGTCTTCTTAACAGCGCTAATGGTTAC
TGCCCATACTGTAATACCAAACGGCCTACTTCCAGTTGCACTAAGATTCGAATAATCAAAATACCAAAGCGCCATTTCACACATCC
CAAGAGCAATTATCGACGATATGTGAGAATGCAACTGCATTAAGTTCTTCCAGAACTGGACAAACCTTAGAAACCAACCGAGCCCA
AGGACAAGGTAAGCCAAAGACATGACTCCGTAGAAGGTCATGAGAGGGACCATCTTCCCAGACAAATAACCATCCGGGTTCCTCCA
TACAGTTCTTCCGGAAATAGTTGTACCCTTGAGTTGTGGATCACAATACATAAAATAAAGGTAATACATTCCGGTTTTATTTATCT
CGATTGATTGAGGAGCCATTTTGGCTTCTGGTTCCTTTCCTGCAAAGAAGGTTTGGATCCGTATTGGCCATTGAGGGTTGTCGTCA
TCTTTTTTGATAATAACCTCTCCTACAGTGCATGACCCATCTGCAGCAAGCTTCGGGGTGCAACAAAACACATGAGAATCATTTTT
CAAAAAGTTGACTCCAATCCTTTCTCTATCTTTCACCTCGAATATTATAGCTTCGACTAATCCAGTTTTACTCTGCATTTCATTTT
GAATCTTGGCTGATTCATCTGTCCTCTTGAAGGTTACGCTCTCAAACCTGATGAATGATTTGCCTTCAATAGGTGAAGTAAGTGTA
ACTGAATCATTATTAGTTTGATTAAAATGTTTAGAAGCGAATAAGCCTTCACTCCCACCGTGAAACAAAAAGGCGTTTAGCTGTGG
TGTGAATAGCTCCTTACGGTATTCGTGAATCGAGCCTTTAATCGGTGGTACAATTAGTAATAATAATAGTAATAATAAAGTTATTA
ATAGTAAGTGATTGTGATTGTGAAGTTGTTTCATTTTATTGAATCTGGAAAGAGTGAAGGAAGGAAGGAAGGAAGTTTGAGACGTG
ACGTCAACGTGTAATGTAAGGGTGTGTGGAAGGTTGGTTGACTGTTTGTGTGTG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002323674 predicted protein [Populus trichocarpa]16952e-186
XP_003615412 Transmembrane protein 87B [Medicago truncatula]16853e-185
CAN66485 hypothetical protein VITISV_015392 [Vitis vinifera]15842e-173
XP_002272360 PREDICTED: transmembrane protein 87A [Vitis vinifera]15814e-173
NP_001050031 Os03g0334800 [Oryza sativa Japonica Group]15761e-172

Swiss-Prot top hits (Blast detail)Scoree value
Q8BKU8 Transmembrane protein 87B4601e-044
Q96K49 Transmembrane protein 87B4582e-044
Q8NBN3 Transmembrane protein 87A4367e-042
Q8BXN9 Transmembrane protein 87A4313e-041

TrEMBL top hits (Blast detail)Scoree value
D7T4B6 Putative uncharacterized protein17705e-195
B9IGU3 Predicted protein (Fragment)16952e-186
G7K640 Transmembrane protein 87B16854e-185
Q8GYD0 Lung seven transmembrane receptor family protein16513e-181
D7KVH9 Putative uncharacterized protein16262e-178

Arabidopsis top hits (Blast detail)Scoree value
AT1G61670.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10980.1); Has 473 Blast hits to 471 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 99; Plants - 92; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).16518e-184
AT1G72480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01070.1); Has 422 Blast hits to 420 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 101; Plants - 83; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).12045e-132
AT1G10980.1 INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61670.1); Has 482 Blast hits to 481 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 255; Fungi - 99; Plants - 97; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).11364e-124
AT2G01070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72480.1); Has 500 Blast hits to 499 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 271; Fungi - 99; Plants - 97; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).11302e-123
AT2G01070.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72480.1); Has 487 Blast hits to 486 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 101; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).11275e-123