Chrysanthenum transcriptome database

Information for unigene UN08949

FASTA Sequence
Unigene ID: UN08949Length: 1234 SSR
GGTTAAGCAAATACCATATCCGGTACAAAAACACATAATAATAACAACATGCAACCACCTTAATTTACACACTTTAAAGCTCCTCA
TTAGTAGACTTACCACCTAGAATCACATTCTCCTTAAAATCTTTGGCTTTCTGCCTATGCGGCTCAGCAGCTTCATCATACTTCTT
ACCCAATGCCTCTTTTGCAGCCTCCAACCCCTCGCCTGCTTTCGCCTTAGTTGCTTCGTACCCTTTTTTCGCCTTCTCCTTAGCCC
ATTCTAAAGACCCTTCACTTCCCTCTTTCGCCTTCTCGGTCGCCTGCCAGGTGACAGACTCCGCGCCTTCTTTCACATTTTTCGCC
TTCTCGTATGCTGATCCTGCACCTTCTTTCGCATTTTCGTAAGCCCCATCCTTCGCATTCTGAGCCTTCTCGTAGGCTGAATCTTT
TACAGACCCTGCAGCATCTTTTACCGAGCCGGCACCTTGTTTAGCCTTCTCGTAAGTTGCATCTTTTACTGATCCCGCTGCATCTT
TCGCCATTTGGGCTTTCTCAAAAGCAGCATCTTTTACTGACCCTGCTACGTCTTTCGCCTTTTCAGCGTTATTGTAAGTTACATCT
TTTACATATCCTGCTGCGTCTTTCGCCATTTTCGCCTTATCAGAGACTGTGCCCATGGTCGCATCTTTAGCCATTTTCGCTTTGTC
ATATGTCTCGTCCTTGGCATATTCAGCACCTTCTTTTGCCTTTTGGGCTTTCTCGTATGACATATCTTTCGCGGATTCTGCGGCAT
CATATGTCTTGTCCTTCATTTCCGATGCCTTCTCACCCGCATTGTGCTTCATTTCTTGTGCTTTGTTCATACCATACTCTCCCGTT
CCTGTGATCTTGTCTTTGGCATTCTTGGCACAATCAAGGGTGGCATCAGTTGCCTTTTGGGCCACATCTTTGGCTTCTTCAGTACG
AAGGCCTAAACCTTCGGATACTTTATCTTTGACCCATCCGGTCCACGACTCCGCAGACTCTTTCACGTCTTTACTTGCCTCAACCG
CTTCATTCCCCGCATTAGCAGCCTTCGTTTTGGCATCCTCGTACTTGATTTCATCGCTAGTTGCCTTGGAATCGCAGATGACTGCC
AGTAACAACATAGTAACCGCCGTAAGAATGACAGTTTTCTTACCATATTTGTGTCCCATGATCAGTTTTGAACGTTACAAAGTTTT
TTCAAAGTATATATATATATATATGTTTTG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
AAT06422 At4g36600 [Arabidopsis thaliana]4073e-037
NP_195378 Late embryogenesis abundant (LEA) protein [Arabidopsis thaliana]4073e-037
CAB16833 putative protein [Arabidopsis thaliana]3492e-030
XP_003562029 PREDICTED: uncharacterized protein LOC100844536 [Brachypodium distachyon]3033e-025
EGT57645 hypothetical protein CAEBREN_08606 [Caenorhabditis brenneri]2811e-022

Swiss-Prot top hits (Blast detail)Scoree value
P20075 Embryonic protein DC-82582e-021
Q03968 Late embryogenesis abundant protein, group 32115e-016
P13934 Late embryogenesis abundant protein 761928e-014
P14928 ABA-inducible protein PHV A11839e-013
Q42376 Late embryogenesis abundant protein, group 31802e-012

TrEMBL top hits (Blast detail)Scoree value
F4JQF1 Late embryogenesis abundant (LEA) protein4073e-037
Q6NKU0 At4g366004073e-037
O23221 Putative uncharacterized protein AT4g366003492e-030
I1H9A9 Uncharacterized protein3033e-025
F4IQI5 Late embryogenesis abundant domain-containing protein2846e-023

Arabidopsis top hits (Blast detail)Scoree value
AT4G36600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryonic development ending in seed dormancy; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G18340.1); Has 4703 Blast hits to 2009 proteins in 504 species: Archae - 12; Bacteria - 1635; Metazoa - 512; Fungi - 269; Plants - 1212; Viruses - 45; Other Eukaryotes - 1018 (source: NCBI BLink).4078e-040
AT2G18340.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein3729e-036
AT3G53040.1 late embryogenesis abundant protein, putative / LEA protein, putative2885e-026
AT5G44310.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein2662e-023
AT5G44310.2 late embryogenesis abundant domain-containing protein / LEA domain-containing protein2662e-023