Chrysanthenum transcriptome database

Information for unigene UN08146

FASTA Sequence
Unigene ID: UN08146Length: 3920 SSR
TTTTGAAGGCTAACAATCCAAATCTGATAACAAATTAAGAATGATAAAAGTGGCCACAAACGACACGCAACAAAATGAAAAACAAG
TGTGAAGAATCCAATCCGGTCCATTCAGGTTACCTGCCCTGAATTACATCAATTTTATCATGCAAAACAATCTAAAGATATACCAT
ACCATACGATCTTCTAAACTCCCCATACCCCGCTCCGGCGGGATTGGGTATTGTTGTTGTTGTTGTATACGATCTTCTAAACTAGC
TACAGTGACTACATAAAAACAATTAATAGACACAACTAACACAACAAACAACTCTCGACACCAAAAAGGAAAGAGTTGTCTGGACT
CTATGCATGCATATATAAAGCCTTTATTTCACTCATCATGTTGAGATAAAAGTCCACAGCTTTCGTCCTATGGAAACTTCACCAGG
ATGCTCAACCTCCTCTTCATCTTCAGAATCAGCGTCCTCCTCATCATCATCCTCCTCCTGGGCAGCTGCAGGAGTTCCAAGCTCTT
GATCATCATTGTGATGCTCCTTATTCTGTTGAGGTGTCCCGTTGACTTCTTCGCTCAAAGCCATATCTTCTACACTCTTGTTTGCT
ACCTCATTCTCCCCATCTACATTATTATGGGCTTGCGAGTCTATGTCATGATCTCCATTTGCAGAAGCTGTTGAAGCTCCAGGCTG
AACCTTTGAAGAGCCACGGGATCTTCTCTTTCTCCCAGCAACACCATTCTCTTTATTTGTGAGGCCGTCAGCCCCATCTTCTTTAC
TTTGATTAGACAGGGTTCCGTTAACAGCCGTGGGGCCTCCAGTCTTTCGGCGTAGGTTGTATCGTGTTACTGGAGGAGCCTCTACA
CCTCTAGCAACTTTCCGCTTCGTGTTCCTGCGACCCCCGGTTGTGACACTGACAGACTGTTCACTGTACTCAGGTTCTTGTACACT
TGCACGTTTACGGCTTTCTGTTTTTCCACCTTTTGATACTCCCTGACTCACTTCATTTGTGTAAGCAGAGTCTTCCGCGACACCAT
TGGCGCTCTCACTTACATTATTGTCACTAGTAGCATTATGATCTCCAACAGCTGCCTTTGTAATACGTGCTCTAGTAGCCCTAGGT
CTAAGCCTCTTAGTCGGCTTACTATTTTCAGGCTGCTGAGGAACTTTCTCAATATCATGTGACTGCTGCTGAGGAACTTCCTCAAT
ATCATGCGACTGCTCCACCTGTCTCTTGACATCATAAGAATCTGACACAACTCTAGCTGACACTTCTGGTTCATCTTCGGAGCTCA
GTATATATTCAGGTATTTCACCAACATCCACAAGCTTCTCTTGTGCTTCTGTTTCACCAGCTTCATGTTCATTCCTTTTCCCTGCT
GAGAATATAGAGATCTTTGAGGTACATTTTTTTAACCATGTGAGGGTTCCGCCAGAACCAGGAGATCCTGAATTAATCATAGCCAT
GGAGGTCCCGACATTTGGTCTCTCAGATGTACCATGAACAGCTTCCTTCAGATAACTGTCAGATAACTTCGGCAACTGAAAATTAT
CAGTGTTCTTAATTTCTGCTAAAGATTGAAGATCAGACAAGACGAACTCCGAAACTATCTCTCCACAGTCCTTGCAGCCCTTCTGT
TTCTCAACAAATGCAATGAACCGTTCACGTTCTCTAACGAATTGTTCACGCTGGTCCTTCAACTTCATGCTAAGTGAAACGAGCTT
ATCAATATCGTTTCTCATTCCAAGCTGTTGCCCTTCTAGATGCTTCTGATTAGCAGATATATCCTGTTTTTCTTTATCTAATTTGA
TTCTTTCTGATTTCGTCTCTTCCATTTCTCTACTTGCAACATCTCTCAAGTATCTCAAATTAGCTAAATCTCTTTCTTTCTCTTCT
TCAAATGATTTTTCACGTTCGAGCATGCGGTTCTCAATCTCAGTTTCTTTGAGTTGCAATTTGGATTCGAGTTCTTGTTTCTTCAC
TTCAAAATCATGAAGCATTTGGGATTCTTTGCTGTTGTATTTTTCTGCTAAGACAGATTTCTCGTGCTCCATGTTAGCAGCAAACG
ATTCTTTGGCCAACTTAAGTGATTCCAACTCTCTCTCTACATAACTCTCGGTTTCCAACCTCATATTATGCAACTTTTCTTCTTCT
AAACGATTCAATTTTTCCATCTTTTCCTTCTGTGCAGCAAAAGAATCCAGTTCCTTCTGTATCTCAGCTCTTTTTTCATCAAGATC
TTCCCACTCTTTTTCGAATTTCTCCTTTTCCAGCTTCAGATTTTCTCGTTCCGTCAGAACGACTTCCCATTCTTGTCTGTTTTTTT
CTATCTCTTGTTTTAATTCAGATTGCAGACGGACAAAATCAGACCTTTCTTCTTCTGTTACTTGAAGTTTTTCCCGATCATCATTC
AACTTTGATCTTTGTTCTTCAATTTCAATACCTATTTTCTCGAGCTCAGCCTTGAGACTCGACAGATTCTCTGTTTCAGTGCTTAG
TTCTTTCCTTACTTTGTCTAAGTTCTTCTCCTCGGCTTTAAGGGACTTTTCTTTCTCCTTTAAAGCCTTTGACTTCAAATCAATAT
CCTTCTCTTTTTCCTTGATTTTCTCGAGTTTCTTTTCCAGAGCTTGTTCTCGTTTAGCGATTTTTCCTTCCAAGTGATTGACTTCA
ATTTCCTTTTTCTCCACTTCAGCGACCTTGATTTTGAAATCCTCATCCAACGATCTCCTCTTTTGTTCCATCTCCAACTCAAAATC
ATGTGTTTTCGCATCCAGCATGACCTTGTGCTCATCCAGAAGTTTTTGAATCTCTACTTGTTCTCTTGCGTTAAGCTTCTCCTCTA
GCTCTAGTAATTCCTTCTCTCTAACCTCTAAGTTCTTGCTAATAACAGCAGCTTCCTTCTCTTTCAAAGCTAGGTTTTCGATCCTT
TTACTAATATCATCTTCTTTACTTTTCAACTCCAAATTAGCCACATCTATCCGCTTCTGTGCTTCTTCAAGATCAAGTTGTTTCTG
TTTAAATACTCTATCACTATCATTCGCAAGCTCTTCCCTTTGGTTGAGCAGTCGACGAACCTCAGCCAGCTTTTCCTCTCCCTCTT
GTAACTTCCTCTCCCATTCTCTTAAGTCCTCCCTTTGGTTGGCTAAGTTCCGTTCATGTGCATCTCTCTCATTATTAAATGACATG
CGCTCTCTCAAGAGTGAACTTTCTTTCGCCTCAAGCTCTGACGATTTTCTTATTATCTCTGACGTCTTCCTGTTGACCTCAGCAAG
CTTGGCATCAACAGCACGTAACTTCGCCTCTACCTCTAATGATCTCCCTTCAATGCTAGCAGACAGAGCTTGTGCTTCCTCCAACT
TTGAATCAGCAGTAAACTTTATTTCTGCATGTTCTGACCGCATTTCACGCAAAGCCTTCTCCAACTCGTTGACACACTGTTTTTCA
ACTCCTAATGCTTTCCTCAACTTCTCCTCTCGCTTCTCCACTTCCGACATTGCAATAAGATGCGCAGTTTGCTCTCGCTTAAGGAG
CTCCTTGGTTTCGGATAATTCTTTTTCAAATTGTTCATTCTTAGAGACGCACTCTTTTTTCTCAATGAGGAGAAGGCCCATGTTAT
ATTGGTATTCATACAGCTCTTTTTCAAGGTTGTTAATTTTATCAATAACAACATCATCTTGATCCATTGAATCTCCAATTGGTTTA
GGAGTAGGGTCCGACCCGGAAGCAGAACCAGTACCAGTACCAATCTTGGGTGAAAGCCAACCCGACCATGTCTTTTTCGGAGTATA
CATCTTGCAGATCTTCTTTAATCAATCATAAAAAGAAACTGACTAAGAATTTTATGTTGGTTATTGTAAAAAAAAAAATTGAAGCG
GACTTGAAAAGAATACTAAATTCCGGTGGATAAAAGGAGTTCAAGTCCGG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002329317 predicted protein [Populus trichocarpa]17718e-195
XP_002525969 DNA double-strand break repair rad50 ATPase, putative [Ricinus communis]16168e-177
BAA20407 nuclear matrix constituent protein 1 [Daucus carota]16086e-176
BAF64421 nuclear matrix constituent protein 1-like [Apium graveolens]16086e-176
BAF64424 nuclear matrix constituent protein 1-like [Petroselinum crispum]16061e-175

Swiss-Prot top hits (Blast detail)Scoree value
Q9FLH0 Putative nuclear matrix constituent protein 1-like protein3402e-030

TrEMBL top hits (Blast detail)Scoree value
F6HSF7 Putative uncharacterized protein18561e-204
B9N1Z9 Predicted protein17719e-195
D2YZU5 Nuclear matrix constituent protein 116222e-177
B9SJ00 DNA double-strand break repair rad50 ATPase, putative16168e-177
A6BME0 Nuclear matrix constituent protein 1-like16087e-176

Arabidopsis top hits (Blast detail)Scoree value
AT1G67230.1 LINC1 (LITTLE NUCLEI1)13331e-146
AT1G13220.2 LINC2 (LITTLE NUCLEI2)11215e-122
AT1G68790.1 LINC3 (LITTLE NUCLEI3)8213e-087
AT1G13220.1 LINC2 (LITTLE NUCLEI2)5973e-061
AT5G65770.1 LINC4 (LITTLE NUCLEI4)3671e-034