Chrysanthenum transcriptome database

Information for unigene UN07072

FASTA Sequence
Unigene ID: UN07072Length: 2844 SSR
ACAAAATTGCAGAAACACAAAGGTAGATCGCTTCTTGCAAGTCTAAGATACATACAAAAAACTTATGTGATCGTGCAAGACATTCT
TATAGTTGAGATCGACAATCGAAATATTTAGCTCCCTCTTCAACTATTTGCTTAATTTCTTGTATCTTCATCTGTTCTTTCAAGCA
AGCTGGATCGAGCAAGATTCAGGTTTTGGGCTTCTTTGGCGGGCCCATGTTTCCAGGCTCAGATTTTCGTTTTATACCCAAGAAAT
TTTCAACCTTCCTATCGCCAAGCATGGGTGTCAAACTCCCTGGGAAGTTCTCCATTGTAGCAAAACCACTTCTCGGATCACTTGTT
TGCCCTGGTTTAACGTGACCACTAAGAACAAGATAAGGTGACTTTGTCTGTAATTGAGCTTCTCTCATCCTTTCAACAGATTGTGA
TGGCGTGTCTGCGTTATTCATTTGCTTCACTTTCAGCTCCTCGTGATATTGTCGCATACGTTTTTCTTGCTTCATTTTACCAGGCC
CCTTTCCATGAAACTTATGAGAAAGCAGCCTAAACGACTCCTTTGGAGTTAAAATTCTTCCATATTCATCTGTCCTCTCGATACGT
ATCTCCTTCTTATCATCATTCTCGTTAACTATGCCCACAAGCTTACTCTTTTTCTTATCCATATTTCTACCACCCCATTCAACAGT
GTCTTTAAGAGTTCCACGATCCTTAAGTAATTGAAGTGCCCCCGATAACCCTTTTCCCAGTGAACTCTCATGAATTGTTTCATCTG
GTTTCACTTCTTCCTCTACATCTGCCATCTTTTCATCCTGAATAACATCTTTTACTTCTGCCCAACCACTATCTTTAACTTTTTGT
TCTTGTTCTGATGGTGCTGGTGCCACATCCTCCTCCATAAAAACATCTTCAGAATCAGGGTTATGAGCTTGTAAAACTACCAGGGT
CGTTCGGTTGGGTAGTAGAAATAGTTCTACCTCCTTTGGAACAGTAAGAGTTTGCTCCATTCTCAATGCTTTAGACGCTTCATCTG
CCTTCATGTATGCATATTGGAACGCATTGTTTCTTTTTTCTGCCTCGGATCTTTCGTGTTCCTCTTTTTGGGCCTGCCTTTTTCCA
TCAGCGCGTGAACCACGGTCCCCTGAACCCAACCCTGCAGACCGGGCCTCTGCTTCAAGTGCCTCAAGGTCCAGCTTATCTTTTTT
TCTTAGTGATTTCTTTTTCTTGGGCTTTTGGAACTTTAGCATCTCCTCACTGGTGTAATAGTCTGATGAGACTTTTCCGGTCGAAG
TAAGATCTTCAAAGCGAGAAGTCACAGATGCACCATCTATCCTCCTACGGAGCTCCTCCAACTTTTTCTCAGCTTCACCACTAAAA
CGTCCTCTTTCATCGAGGGTTACACCCTCATTCACAATAGGATCATCATATTGTGGAAGCATTTTCTTTTCAAATCCAGCTTCTTC
ATTAAACTTATCATCATAAACTCCAGTTTTCTTTTTAGCTGCCTTATAAGCCTCGTTTCTCCGCTTCTGCTCACCAATCTCCACAT
TTTCAAGCATATCAACCTCTTGATTAATGTCACCATCAGCAAGTATGTTCTGATCTTTCAGTGTCAAAACAACTGCACCACCTTCA
ACCACCTTGTCAAGGCCATCAAGAACTTTAAATCCAGCAAGGTCACGAGATGTATGTCGGCGAGCTGGTGGTTCGTCATCATCCTC
TTCTTGAGTCACATTGTCCCGCTCTTCAAACATCTTTGAGAAATGCAATGCTTTCTCCTTTTCAGCCTTCTTCTTCTCCTCAAGTT
TCCGGCTTTTACTAACCCACGACAACACATCGGAAGCACCATCTGACGTTTTTTTCAATCGCTCTTCCTTCATCCTCATAATACGA
TCTTGGAGATCAGATGCAGACTGTTGCGATCCTCCATGTTCGCCTTCAGAGCTGGCCTCGTTCTTACTGGTTTTAACTTCATCCCT
GCCATGACGAGACCCTGTACCATGCTTACTTGTATCCCTAAACTCACCATCCTCGGAATCAGAGTTCGCTGCATCTTTCCCCAGGT
CTTTACTTCCATCATGAAACTCGTCGGGTTGCTTGCGGCTGGCTTTATCTCTATCGCTGGACCTATCTTTATCATGATCTCCATCC
CTCTCTCTATTTCTCTCTCGATCCCTATCTCCGCGAGATTCTCTCTCTTTATTTTTCTCTCTCTCCTTTTCACGTGTCCTATCTTT
ACCTTTGTCAATTCCCTTTTCTCTATCCCGTTTCTCCAACTCTTTCTCCCTCTCACGATCTTTATCCCTTACCTGATCTTTATCTC
TGTATTTTTCCCTATCATTTTCTTTCTCCCTAACCTTGTCTCTGCTCCTTTCTTTTTCACGATCATCCACGTCTTCCTTTCTACGG
TCTCTGTTAGATTCTTTTAGAGAACCTTTAGACTCTTTGTCTCTTTCTTTTGAGGCATCACTGATCTTTGACTTTTCTCGATCTCG
ACTTCTGTGATCTTTCTCGTCTCTTCGACTACTCCTACTTTTCTCCTTACTGTGATGCTTTGATTCTCGTGATTTATCATTGCCAT
TATCTTCCAAATCATCATATCCTCCCTTCCACCTCTCACCCCTTGGAGACTCGTCTAGATCCCTAGTCTCAACACTTCTCCTACGT
CTTGTATCAGACCGCTCTGTATCCATTGTGATTACAATTGTATTGCAGAAGTATATGATAGTAGATGATCAACCGTGAATCTGATG
TTTAAGAGGATGAAGTAAGTTCAATTTGATGTGTGTGTGTGACTGTGTGTGTTTTTAGGGTTCTAATTTTTTAACAGAACATTTTG
AGGGAG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI40671 unnamed protein product [Vitis vinifera]9921e-104
XP_002264268 PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]9751e-102
XP_002873791 hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp. lyrata]9113e-095
NP_197180 U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana]8872e-092
BAH20245 AT5G16780 [Arabidopsis thaliana]8872e-092

Swiss-Prot top hits (Blast detail)Scoree value
O43290 U4/U6.U5 tri-snRNP-associated protein 12442e-019
Q9Z315 U4/U6.U5 tri-snRNP-associated protein 12442e-019
Q5XIW8 U4/U6.U5 tri-snRNP-associated protein 12442e-019
O94538 U4/U6.U5 tri-snRNP-associated protein snu661375e-007

TrEMBL top hits (Blast detail)Scoree value
D7UD56 Putative uncharacterized protein9921e-104
D7M881 Putative uncharacterized protein9113e-095
B9RRZ7 Putative uncharacterized protein8962e-093
B9DHM8 AT5G16780 protein (Fragment)8872e-092
B9GK56 Predicted protein8872e-092

Arabidopsis top hits (Blast detail)Scoree value
AT5G16780.1 DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2)8875e-095
AT3G14700.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, 4 anthesis, LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2) (TAIR:AT5G16780.1); Has 217 Blast hits to 217 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 65; Plants - 16; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).2665e-023