Chrysanthenum transcriptome database

Information for unigene UN07070

FASTA Sequence
Unigene ID: UN07070Length: 3039 SSR
ACAAAATTGCAGAAACACAAAGGTAGATCGCTTCTTGCAAGTCTAAGATACATACAAAAAACTTATGTGATCGTGCAAGACATTCT
TATAGTTGAGATCGACAATCGAAATATTTAGCTCCCTCTTCAACTATTTGCTTAATTTCTTGTATCTTCATCTGTTCTTTCAAGCA
AGCTGGATCGAGCAAGATTCAGGTTTTGGGCTTCTTTGGCGGGCCCATGTTTCCAGGCTCAGATTTTCGTTTTATACCCAAGAAAT
TTTCAACCTTCCTATCGCCAAGCATGGGTGTCAAACTCCCTGGGAAGTTCTCCATTGTAGCAAAACCACTTCTCGGATCACTTGTT
TGCCCTGGTTTAACGTGACCACTAAGAACAAGATAAGGTGACTTTGTCTGTAATTGAGCTTCTCTCATCCTTTCAACAGATTGTGA
TGGCGTGTCTGCGTTATTCATTTGCTTCACTTTCAGCTCCTCGTGATATTGTCGCATACGTTTTTCTTGCTTCATTTTACCAGGCC
CCTTTCCATGAAACTTATGAGAAAGCAGCCTAAACGACTCCTTTGGAGTTAAAATTCTTCCATATTCATCTGTCCTCTCGATACGT
ATCTCCTTCTTATCATCATTCTCGTTAACTATGCCCACAAGCTTACTCTTTTTCTTATCCATATTTCTACCACCCCATTCAACAGT
GTCTTTAAGAGTTCCACGATCCTTAAGTAATTGAAGTGCCCCCGATAACCCTTTTCCCAGTGAACTCTCATGAATTGTTTCATCTG
GTTTCACTTCTTCCTCTACATCTGCCATCTTTTCATCCTGAATAACATCTTTTACTTCTGCCCAACCACTATCTTTAACTTTTTGT
TCTTGTTCTGATGGTGCTGGTGCCACATCCTCCTCCATAAAAACATCTTCAGAATCAGGGTTATGAGCTTCTTCATCAAGCTGAAG
ACCCCATACAAACTCCTCCATCTCGGTAAACACAACCTTATTATCTTGTGACTCTCCATTGTCTGCATCTGCATTCTTACTAGTAG
AAGAAGCAAGTAGAGCAATTGCTTGTGGGCCTGAAGGTGTTTCATCTTTCATCTTCAACGCTACTTTTCTTGCCCTTTGTAACGAT
TTATGAAGATCATCGTCATCATCACCAAACACGACCTCCTCTTCTTCTTCTACCTCCTTTTGAACAGTAAGAGTTTGCTCCATTCT
CAATGCTTTAGACGCTTCATCTGCCTTCATGTATGCAGATTGGAATGCATTGTTTCTTTTTTCTGCCTCGGATCTTTCGTGTTCCT
CTTTTTGGGCCTGCCTTTTTCCATCAGCGCGTGAACCACGGTCCCCTGAACCCAACCCTGCAGACCGGGCCTCTGCTTCAAGTGCC
TCAAGGTCCAGCTTATCTTTTTTTCTTAGTGATTTCTTTTTCTTGGGCTTTTGGAACTTTAGCATCTCCTCACTGGTGTAATAGTC
TGATGAGACTTTTCCGGTCGAAGTAAGATCTTCAAAGCGAGAAGTCACAGATGCACCATCTATCCTCCTACGGAGCTCCTCCAACT
TTTTCTCAGCTTCACCACTAAAACGTCCTCTTTCATCGAGGGTTACACCCTCATTCACAATAGGATCATCATATTGTGGAAGCATT
TTCTTTTCAAATCCAGCTTCTTCATTAAACTTATCATCATAAACTCCAGTTTTCTTTTTAGCTGCCTTATAAGCCTCGTTTCTCCG
CTTCTGCTCACCAATCTCCACATTTTCAAGCATATCAACCTCTTGATTAATGTCACCATCAGCAAGTATGTTCTGATCTTTCAGTG
TCAAAACAACTGCACCACCTTCAACCACCTTGTCAAGGCCATCAAGAACTTTAAATCCAGCAAGGTCACGAGATGTATGTCGGCGA
GCTGGTGGTTCGTCATCATCCTCTTCTTGAGTCACATTGTCCCGCTCTTCAAACATCTTTGAGAAATGCAATGCTTTCTCCTTTTC
AGCCTTCTTCTTCTCCTCAAGTTTCCGGCTTTTACTAACCCACGACAACACATCGGAAGCACCATCTGACGTTTTTTTCAATCGCT
CTTCCTTCATCCTCATAATACGATCTTGGAGATCAGATGCAGACTGTTGCGATCCTCCATGTTCGCCTTCAGAGCTGGCCTCGTTC
TTACTGGTTTTAACTTCATCCCTGCCATGACGAGACCCTGTACCATGCTTACTTGTATCCCTAAACTCACCATCCTCGGAATCAGA
GTTCGCTGCATCTTTCCCCAGGTCTTTACTTCCATCATGAAACTCGTCGGGTTGCTTGCGGCTGGCTTTATCTCTATCGCTGGACC
TATCTTTATCATGATCTCCATCCCTCTCTCTATTTCTCTCTCGATCCCTATCTCCGCGAGATTCTCTCTCTTTATTTTTCTCTCTC
TCCTTTTCACGTGTCCTATCTTTACCTTTGTCAATTCCCTTTTCTCTATCCCGTTTCTCCAACTCTTTCTCCCTCTCACGATCTTT
ATCCCTTACCTGATCTTTATCTCTGTATTTTTCCCTATCATTTTCTTTCTCCCTAACCTTGTCTCTGCTCCTTTCTTTTTCACGAT
CATCCACGTCTTCCTTTCTACGGTCTCTGTTAGATTCTTTTAGAGAACCTTTAGACTCTTTGTCTCTTTCTTTTGAGGCATCACTG
ATCTTTGACTTTTCTCGATCTCGACTTCTGTGATCTTTCTCGTCTCTTCGACTACTCCTACTTTTCTCCTTACTGTGATGCTTTGA
TTCTCGTGATTTATCATTGCCATTATCTTCCAAATCATCATATCCTCCCTTCCACCTCTCACCCCTTGGAGACTCGTCTAGATCCC
TAGTCTCAACACTTCTCCTACGTCTTGTATCAGACCGCTCTGTATCCATTGTGATTACAATTGTATTGCAGAAGTATATGATAGTA
GATGATCAACCGTGAATCTGATGTTTAAGAGGATGAAGTAAGTTCAATTTGATGTGTGTGTGTGACTGTGTGTGTTTTTAGGGTTC
TAATTTTTTAACAGAACATTTTGAGGGAG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI40671 unnamed protein product [Vitis vinifera]21561e-239
XP_002264268 PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]20834e-231
XP_002516516 conserved hypothetical protein [Ricinus communis]19761e-218
XP_002873791 hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp. lyrata]18334e-202
NP_197180 U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana]18092e-199

Swiss-Prot top hits (Blast detail)Scoree value
O43290 U4/U6.U5 tri-snRNP-associated protein 12442e-019
Q9Z315 U4/U6.U5 tri-snRNP-associated protein 12442e-019
Q5XIW8 U4/U6.U5 tri-snRNP-associated protein 12442e-019
O94538 U4/U6.U5 tri-snRNP-associated protein snu661376e-007

TrEMBL top hits (Blast detail)Scoree value
D7UD56 Putative uncharacterized protein21561e-239
B9RRZ7 Putative uncharacterized protein19761e-218
D7M881 Putative uncharacterized protein18334e-202
B9DHM8 AT5G16780 protein (Fragment)18111e-199
Q9LFE0 Putative uncharacterized protein F5E19_12018111e-199

Arabidopsis top hits (Blast detail)Scoree value
AT5G16780.1 DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2)18114e-202
AT3G14700.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, 4 anthesis, LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2) (TAIR:AT5G16780.1); Has 217 Blast hits to 217 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 65; Plants - 16; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).2683e-023