Chrysanthenum transcriptome database

Information for unigene UN06421

FASTA Sequence

Unigene ID: UN06421	Length: 2435	SSR
AACTCGGTAATAAATACTATATAGAAAAGAAACGACAACCATCCATTTGTTAACAACTCCGTTACATAACAAAAGAAAGTGGGGAA AATGAAAAGCACCCCAAAGAATGGAAAACAAAACTAAATAAAGATCATCATTCGGTAACAAGGAAAGAGGACACTATATAATTAGG AGCCATATTGGCAATATTTTCTTCATCATATCAAAACTGCTCAAGCACTTGGCTTTTAAAACCTTTCTAGAGTAGAATCCGGATGA GGTTCTTTTTACCATTTCTTATAGCCCCCACGGCCACCTCGACTACCTCCACCTCCAGATCCTCTAGAAAACCTATCATTCCCACG TTGGAACCTACCACCACTATTTCCACGTTGGAACCTATCATTTCCAAATCTACTACCCCTTGATTGCTCTTTTTCTTGCAATTGAG GAAGTTCTTTTACCACCTGCAAGCTTACGCCTGTTGCATTCTCCTGGCCAGCAAGGAAAAGGTCTACATCTGCTGCAGCAACATCA AAAACAGCACCTCTTTGATCAGCTGTCAATGCAAGACCTTGAATTGACTCCACTTTGTCTTCAGGTAGAAATCTCCTCAATACACC ATAAGCAAATGATGGTGTGTAACAGGGTCTTCCAGCCTCAAGAAGTAGTGTCACGTAGTTCTCCATGGACGTTAAAACTGACCTCT TCTTAATTTCAGTATACCCAATACTCTTGGCGAGTGCCTTTGCGAGCAGTTCTACAGGTGATAAGCCAGAAGATTCTAACAACTCT GCTGCAGCGGCCTTGAAAACAGGAATCACACTGTCAGAAACTGAATTTATTGCCTCTGCAGCATCACCTCCAGCAGCTTTAGCAAT ATCAGCCGGTTGAGGAGCAGACACATGTTCAAATTTAACACCTGCTTCTCTCTCTAACTTGGCAATATTTCCCTTCCTTGGTTCAT AGAGTGTAATGGCAACACCAGTATTACCTGCTCTTCCCGTCCTACCAGATCGGTGAATATAGTCTTCAACATCACGTGGTGGCTCA CACTGGATGATCAACTGAACATCTTGAATGTCAAGTCCTCGTGCCGCAACATTTGTGGCAACTAGTGTCATGAATTTGCCTGATCG GAATCCCGCAAGTGTTTGCTCACGCACAGACTGCTGAATGTCCCCATGCAGAGGTCGTGCTCCAGCTAGTAGTCCAGAAAGTTCAG AGCAATAATCCTTGGTTTCGGTGAAAACAATAGTGCGGCCTCCACTGCTATGATGGCGAATAATATCAGGAATAACCTGGGACCTC GCATTCCAAGAGCAAGGCATGATGATGTGCCTAACACTTTCGCTGGCCTTCATTACCTTAAGACCAACAAGATCCACAATTTTCCT GTCTGACTTCAAAAACTTGGCTGCAATTTGATTCACCCAATTTGGTAGAGTTGCACTGAACAGAACTGTCTGAACCTTGGTAGCAT CGTTCACCTTGCTTAAAATATATTCAACATCTTCAACAAAACCTTGCCTCAACATTTCATCGGCTTCATCAAGGATGCGGAACTTC AATGATTTCAAGTCAAGATTGCCTCTCTCAATGTGATCCTTAACACGGCCAACTGCTCCTACAACAATATCCACCCCTCTTTTCAA TAGTGTAGTTTGAGGACCAATTGATGCTCCTCCTCCACCGTACAAACAGCATGCGGTCAACCCCACAGACTTGCCGTAGTATTCAA AGTCTGTAAATACCTGCTTTGCTAATTCTCTTGTGGGCAAAAGCACGAGAATTGTAGGTGCTCTGCCATACCCAGTCTTACGTGAT GCTTTCTCAGGTCCATTTGTTAGAGACTCCAATATTGGTAAAATGAAGGCCAAAGTTTTCCCCTGGCCAGTTTTAGCTTTCCCAAT CAAATCAAGACCGTCATAGACAGAATCAAAAGTCTGAGCTTGGATAGGAAATAACGCCTCAATCCCCTTAGCCTTCAAAGCATTCT TCAAAGGCTCGGAAATCCTAAACTTGGAAACCGCATTAGGATTTTCCGCTATAACCTCAGCCATCACTTCATCTACCTCAGCCGTA TCAGTCTTCACTTTTTTCTTCTTACTTTTCTTCATAGACTCCTCAGCCTCGGTAGGTTCAATTAAAACAGAGGTATCAGAATCATC ATTAGCTTTACGTTTCTTCTTACTACTCTTCTTCTCAGCTTCATCAGATAACACCAAACTCTCCGTTGACTTACTCTTCTTCATCT TCTTCTCCTTCTTTTTAGCTCCCTCAGCTGTTTCAGCCGCTAAGTTTTTAACCTTGTTGATTTTAGTTTCGGTTTCAGATAGATTG GATAGTGAAGGCATGGTTAGGTTAGGTTAATTTGTTGATAGATGCTCCTTTTTTATTTTCCTTGCTGCTGCTGCTGCTGCTAAAAT GTGTAAAAGCGGTTGCTAGCAGAGATG

Annotation (GO annotation)

GenBank top hits (Blast detail)	Score	e value
XP_002269873 PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis vinifera]	1950	8e-216
XP_002510890 dead box ATP-dependent RNA helicase, putative [Ricinus communis]	1922	1e-212
AAF40306 RNA helicase [Vigna radiata]	1916	7e-212
XP_003556075 PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]	1898	9e-210
XP_003536498 PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]	1885	3e-208

Swiss-Prot top hits (Blast detail)	Score	e value
Q39189 DEAD-box ATP-dependent RNA helicase 7	1779	2e-197
Q650T9 DEAD-box ATP-dependent RNA helicase 7	1741	5e-193
Q41382 DEAD-box ATP-dependent RNA helicase 7	1740	6e-193
Q9NR30 Nucleolar RNA helicase 2	997	9e-107
Q9JIK5 Nucleolar RNA helicase 2	997	9e-107

TrEMBL top hits (Blast detail)	Score	e value
F6HAJ0 Putative uncharacterized protein	1942	7e-215
B9R9L5 Dead box ATP-dependent RNA helicase, putative	1922	2e-212
Q9M6R6 RNA helicase	1916	8e-212
I1NGM0 Uncharacterized protein (Fragment)	1898	9e-210
I1LDY0 Uncharacterized protein	1885	3e-208

Arabidopsis top hits (Blast detail)	Score	e value
AT5G62190.1 PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding	1779	1e-198
AT5G26742.1 emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding	785	3e-083
AT5G26742.2 emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding	785	3e-083
AT3G22330.1 PMH2 (putative mitochondrial RNA helicase 2); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding	619	5e-064
AT3G22310.1 PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding / RNA binding	598	1e-061