Chrysanthenum transcriptome database

Information for unigene UN01237

FASTA Sequence
Unigene ID: UN01237Length: 1038 SSR
AGCTTCTAGAGAATCCAACACGAGAAGGAGAACCACTTGATGATAGCAAACCAGAAAATCTCCCTGAATCATCTTTTGATACCTTA
TGAGCAGAATAATGATTTGTTGAGCCTGAACCAGAGCTCAAGTCCCCAACCCTTGACATGTCTGACTTTTTAAGGGACCTGATTCC
AGAAGGAGACTCGTGAGATGAAAGTTCATGGCGTGTGCTTCTAGGTGATGGGGGTGGAAGCGAATGTCGATTAGGATCAGACATGT
TATTAGGAGAAAGGTATCTGGGACTTCTGGTCATCATGGCATTATTAGGTATAGTAACAGGGGCACTAGTCTCCGAGCGCAGCCGA
GAATGCAAGTAATTCCCACCACCGGAGATGTATGTTGGCGGAGATGGTGAAGGGGATGGAGAGAATGGTGGTGACAGTTGATACTC
ATCAAAGCTGGTGTGAGTTGTCGTTGGTGGTCTCATTCGTTGACCATAAACAACATCTGTAGGGGAAGAAGACAGATCATAACGGC
CACTGGAAGAGCGAAACGCAGGTGGTGATGGTGAGCCAAGATGTGTAAATGGAGGAGGAGGTCCCCGGGCACTGGGGGACCAGCTG
TGTGGGCGTTGTTGAGGTGGATGCATTCTCTTATTATTATCCATGGTGATGGGGAAGGCCCTAAAAGGGTCAGTTGCAGGGCTGCC
GACATAATCAGTAATGATCTGAGTTGGAAAAGATGAAGAGGTATCCAAGTTGAAATCGGAGAGGGTTTCACGATAGTTGACGGAAA
TGGAAAGGCGTCCATTCTGGGCTTCAACAGGAAGGAAAGTGTATTGTTTCATGAGTTGTTCCTCGGACCTTGAAAAGGGGGAGGTA
AAGGAAGAGACCTTGTAATTGATATCAAAATGACAAGAAGAAGAAGAAGAGGCAGTAGGTTTGGTAGTTAGGTTTCGGTAAGCCCT
GTAAGCGGGAAGGAGCCTAAGCATAGCATAGAGAGAGCGTAAGAGGATGATGGACTTCTTGTAAGTTTTCTTATAAGAAGAAGAGG
AGGAGG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_003544848 PREDICTED: uncharacterized protein LOC100818104 [Glycine max]5443e-053
XP_002875976 hypothetical protein ARALYDRAFT_485316 [Arabidopsis lyrata subsp. lyrata]3382e-029
NP_190528 Autophagy-related protein 13 [Arabidopsis thaliana]3364e-029
NP_001190043 Autophagy-related protein 13 [Arabidopsis thaliana]3364e-029
XP_002269623 PREDICTED: uncharacterized protein LOC100245198 [Vitis vinifera]3132e-026

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
F6H7A9 Putative uncharacterized protein5703e-056
D7LSK6 Putative uncharacterized protein3382e-029
F4IXZ6 Autophagy-related protein 133364e-029
Q9SCK0 AT3G49590 protein3364e-029
I1MB45 Uncharacterized protein3312e-028

Arabidopsis top hits (Blast detail)Scoree value
AT3G49590.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18770.1); Has 1841 Blast hits to 549 proteins in 149 species: Archae - 0; Bacteria - 58; Metazoa - 305; Fungi - 125; Plants - 73; Viruses - 5; Other Eukaryotes - 1275 (source: NCBI BLink).3361e-031
AT3G49590.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18770.1); Has 1841 Blast hits to 549 proteins in 149 species: Archae - 0; Bacteria - 58; Metazoa - 305; Fungi - 125; Plants - 73; Viruses - 5; Other Eukaryotes - 1275 (source: NCBI BLink).3361e-031
AT3G18770.1 LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49590.2); Has 376 Blast hits to 291 proteins in 100 species: Archae - 0; Bacteria - 15; Metazoa - 70; Fungi - 108; Plants - 62; Viruses - 7; Other Eukaryotes - 114 (source: NCBI BLink).2113e-017