Chrysanthenum transcriptome database

Information for unigene UN00440

FASTA Sequence
Unigene ID: UN00440Length: 704 SSR
CTCCAAGTACTTTGGATTGACATGTATACCATGAGCAGGTCTCGGAGATTCTGAAGCTTTTATACCAGAAGATGGGTAACTTGACG
ACGGGGAAAACTGTAGTTCAGTTTCAATTTTGCGAAGGACAGGTGACGGGAATACAGTTGACCAGGTACCAAAAAGATGGCGCATA
GAAGGATGCATATTTGGGTGGACTTGCCTATATGCCAAACAATATACCTCAGGCAAGCGAGCAGAAAAATGCCTCACGTAGTCTTT
ACCAATATTCTTGACAATACTATCCAGAAGATATAAAGAAGGAAGTTTATGTTCAACTGGAACCTCGATAATTCGGGCACAAATAG
CATCAGCAATACCCGCGCCATGTATCCGCTGCTCGCCCGCGATAATCGTCAAGTCCGTAATAATCGGTTTCGAATTAATAACCAAT
TCACTCAACACAGCTTCGTAAACCTCCACAACCTCATCAGTACTCAATGCCACGTCATCATCGTCATCTTCCCCCACACGTTCTTT
TAACAAGGCTTTGAATCGATCAACGATTGGAGTTAGTGATTTGGTGGTGTCGGATTGTGGCTGTGGTGGTGGTGGTGGTCTGTATC
GGTTTTGTGTTAGGTAGCTTGTGCCGTCCATGAATTGGATTGGGTTGGATTTGGGGGGGAAATTAGGGTTTTGATTGATTAATGAA
GCATTGTGTGTTTTGG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002264786 PREDICTED: uncharacterized protein LOC100255600 [Vitis vinifera]6481e-065
CBI23183 unnamed protein product [Vitis vinifera]6481e-065
XP_002304927 predicted protein [Populus trichocarpa]6382e-064
XP_002872717 hypothetical protein ARALYDRAFT_490122 [Arabidopsis lyrata subsp. lyrata]6311e-063
BAC43722 unknown protein [Arabidopsis thaliana]6202e-062

Swiss-Prot top hits (Blast detail)Scoree value
O94913 Pre-mRNA cleavage complex 2 protein Pcf112068e-016
Q10237 Uncharacterized protein C4G9.04c1834e-013
P39081 Protein PCF111664e-011

TrEMBL top hits (Blast detail)Scoree value
F6H7L4 Putative uncharacterized protein6481e-065
B9H1F7 Predicted protein6382e-064
D7M1V0 Putative uncharacterized protein6311e-063
Q0WPF2 PCF11P-similar protein 46202e-062
Q8GW12 Putative uncharacterized protein At4g048856202e-062

Arabidopsis top hits (Blast detail)Scoree value
AT4G04885.1 PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding6207e-065
AT2G36480.1 zinc finger (C2H2-type) family protein3062e-028
AT2G36480.2 zinc finger (C2H2-type) family protein3062e-028
AT2G36480.3 zinc finger (C2H2-type) family protein3062e-028
AT2G36485.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding (TAIR:AT4G04885.1); Has 87 Blast hits to 87 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 33; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1271e-007