Chrysanthenum transcriptome database

Information for unigene UN00188

FASTA Sequence
Unigene ID: UN00188Length: 3104 SSR
TTCTTGTAAACACGGTAAAATACTTTTATTAATTTTTATTCTTTTATTGTACAAATTATTTCTGTATTGACATATATCTCTCTAGT
ATCCGTAATTTGTTGAAGCAATAAAATCAAGATCTTTTCTTTAGCTTTGTGCTTCCATTTGAGGTGAAATTTTTTCCATTTCTCTG
TTCTTGCCAAGAACTTCGTTTTGTCCGTACGATTGGTTCCTCTACTTCTTCTTCTTCTTGTTGTTCTTCAACTACTTCGTCTTTCA
TCATTGATTGTTGATAGTATTTGAATGCCACTAACAGCACAAACACTGCCCAAATACGAGCAACGACTGAGGAAAAATTCCAAACA
AGGGTGAATATACCAAAAGCAACCGCTTTCTTTTGAGAGCATGAATCCCAAGCATCCTTAAAGCGTTGAACCCAAAATGTACCATA
ACCACTTAGTTGAGAAGAATATGAGGAGCATATCTTAGGCACTGTAAAAACACCAAAAAAACCCAATTTGGCCATTTTCCAAATAG
TTATAGAGCTGCCACTTCTTGCCAAAATAAAGAGCAGCACTGCTAACTTCATTGTAGTAGCTGGATCACCTGAAAACAAAGCTTTG
ACTTTTAAAAGAAACTCATTGATGTAAGGTAAGAATAATTTCAATGCCCATATTGCTTCATCTTCACCAACAACATAATCTTCATC
ATCTATTGTATCACCTTCTTCTACAACACTCCTGAGAATAAAGGACTTAAAAATGAATCTTGCAGCAAGATAGATGAGACCCATGT
AGGATATTACAGAAATGAAGCTAATATTAAGGTCTTGAGTATATGATGATGAGATAATAGTAAATGTCCCTAAACCAAATATCAAT
GCTGACTTTGATGCATCATTCCACATTATCAAATCAATGAAACTTTGCAACTTGTTATGTGATCTGTGGACTCTTTGTGATGGTAA
TTCATTTGATCTTGAAATGACTCTAGGATGATTTACAACAGGATGAGGTTTTCCAAGTTGCCGTGGCAAGTTTGTTATGAATTAAG
ATTAGGCTCAGATATGTATATGTTGGTCAGGTCATAGAGGTCTCCGAGTTCTGTTATGGCTGCAAAGGAATCCGGTTGCAAAGCAG
GTATATACGTGTGATTTTCGCATAAAACATCTGATCCGTTCAATTATCAGTAGCATTAGAAAATAGCCAATTTGATCCTGAGCTTA
GTCTGCTAGCCTCCTCTTTATGAGATCCTGCATCAGTTAAAGAACGGGCCTCACTTTGGCAAAGCACCTTAGGATGAACATCATTC
ATGAGTGTCACCTAGTGAGCCTTTGGTTTCTCGAGTTGTTTATTCTTTGCCACCACAATGTCAATCAATCATTTTGCTTGGTCGAC
AATTTTGGTTTATACCCCAGTGTCATGTTCTCCATCGTTGCAATCAAGTTGCCAAAACCCACACCCAGCTGCTGCAGCACCTTTAT
CATTTCAGTTTTTTCAGTTATTTCCGTTTTTTTAGAGCTAGCTTCTTTTTTCCCATGTTTTGTGGCAGATGATGATGCAGTAGCAT
GTGTATCTTGTACTGTCTCCAACAAGATCATACGGGTATACTCACTTACAACACCAGTCTGCATGCTTAGTTTTGCCACCTTTTCC
TCAAGCTTTTTATCTTGTGAAAACCATGCTTTTGTCGTGTATTGCTCAATTTGTTGCTTCGCCAGGACCTTGTCAAGAGGTATGTC
CTTTGGCCGCTGGACCTTCAGGTCAATGGTGAAGCTACTCATATCGGCACGGACCCCCCTTACTTTCAGAGTTTCCGGAAAACCAC
CCTTGTACTGCCCAAATAGTATTAATGGCCCTTCCGAATATACATCTGGTACAACTGATGGATAAACCTCAAGAGCATCAAGATCA
TCTAGACCATCAATTTCAATGTTGAGCACAACCGTTGAAGCAGCTCTGGAAAACAAAGCTTCCATTTGAACTACAACTGAATCTGC
ATCAGGCGCAGCATCAAAATGGCCCCTACCAATCATTGCAAGCATTCGCAAAAAGTATTGGTTGCAGAATGAACCTATACCAAACG
TGCAAATGCGTGGACAAAGCTCTGATCCTTGACTTCTTAGTTGCTTTTTCATAACTTCACAAATTTGTCTTTCATCTTCAATGGCC
CCGTCGGTTATAAAAAATATTATTGGAAGTGATTTCTTGCTCCCAGATAGCATCTCTATGGACTGATTAAGAGCAGCCGACATGTT
GGTGCCACCACCAGCAATGAAATTCATGCCAATCCAGTCGGTTGCTTTTTGAAGAGCTTCCTTTGTAGCCAACTCAAGAGTTGATG
AATATAAGTAAGTTTGGTCATTAAACGCCATGACATTAAATGAGTCCCCTTGATCCAGCTTTGACATTGCTGCAACAACCGCACTT
TTTGTAGCTTCAATTGTCCTCCCCTTCATGCTTCCACTTATATCAACAACAAAAAGCACTTCCTTCCTGATCACCTTTTTGCTGAG
ATCAGGCCCTGGGAATAAGTACAAAGAAAACATCTCACTTTGGTCGATACTGAGTGACGATGGAGACTGCAAAATGACGCCACCAA
ATGCATTGCTTTGAGGAACCGCATATGTAAACACAAAATTAGTACTTGACCACGCAAGAACTTCCGCTTCATACAAGAAAGCCAAT
TTCTCAACTACCCGCTTTTGCTCCTTCAAAGGATGACTCGCTGACCTAACCACAACCTCTGTGCCCAATCCAACATTGACGCTCAA
CTCTATCTTTTCCTTTTTCGATAGCTTCTTTCCAGCAGGAGTAACATACTCTGGGAAACTGAAAGGAATATTTAACGTGAATTCAC
CGTCTTTATAAGATATTTTCTGTGACCATTTAACTTTGACTGAAAAATTTGAACCGCCATCAACCTGTGGTATAGTCAATGTAAAT
ATATTAGGCTTGAGAAATCCACCATCTTCGGGTTTGCCTACACTTTCCGTCTCCCCCTTTTCATCCATGACAACTAGCTGCGTCTT
ATACGACTTTCTGATAAGTTGAACCTCAACACCTAGAATTGAACCCTGTGGGCCCATAGGGACAGCAAGGCGGACATCACAAGCAG
CACTCCCC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002277641 PREDICTED: inter-alpha-trypsin inhibitor heavy chain H3 [Vitis vinifera]16571e-181
XP_003551107 PREDICTED: uncharacterized protein LOC100777542 [Glycine max]16131e-176
XP_003542365 PREDICTED: uncharacterized protein LOC100800834 [Glycine max]16041e-175
NP_173345 inter-alpha-trypsin inhibitor heavy chain-like protein [Arabidopsis thaliana]15037e-164
XP_002890318 hypothetical protein ARALYDRAFT_472131 [Arabidopsis lyrata subsp. lyrata]14472e-157

Swiss-Prot top hits (Blast detail)Scoree value
Q56X72 Reticulon-like protein B217121e-073
Q6DR04 Reticulon-like protein B173742e-034
Q8LDS3 Reticulon-like protein B183625e-033
Q54DU5 von Willebrand factor A domain-containing protein DDB_G02920282173e-016
P19827 Inter-alpha-trypsin inhibitor heavy chain H12003e-014

TrEMBL top hits (Blast detail)Scoree value
D7TCC8 Putative uncharacterized protein16571e-181
B9RR85 Inter-alpha-trypsin inhibitor heavy chain, putative16401e-179
I1MS95 Uncharacterized protein16131e-176
I1LY70 Uncharacterized protein16042e-175
B9IND3 Predicted protein (Fragment)15745e-172

Arabidopsis top hits (Blast detail)Scoree value
AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-related15032e-166
AT1G72500.1 inter-alpha-trypsin inhibitor heavy chain-related12146e-133
AT5G58000.1 LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: reticulon family protein (TAIR:AT4G28430.1); Has 1047 Blast hits to 1034 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 715; Fungi - 46; Plants - 58; Viruses - 4; Other Eukaryotes - 222 (source: NCBI BLink).7121e-074
AT2G20590.1 reticulon family protein3742e-035
AT4G28430.1 reticulon family protein3624e-034