Chrysanthenum transcriptome database

Information for unigene UN00041

FASTA Sequence
Unigene ID: UN00041Length: 3400 SSR
TTTTGAAGGCTAACAATCCAAATCTGATAACAAATTAAGAATGATAAAAGTGGCCACAAACGACACGCAACAAAATGAAAAACAAG
TGTGAAGAATCCAATCCGGTCCATTCAGGTTACCTGCCCTGAATTACATCAATTTTATCATGCAAAACAATCTAAAGATATACCAT
ACCATACGATCTTCTAAACTCCCCATACCCCGCTCCGGCGGGATTGGGTATTGTTGTTGTTGTTGTATACGATCTTCTAAACTAGC
TACAGTGACTACATAAAAACAATTAATAGACACAACTAACACAACAAACAACTCTCGACACCAAAAAGGAAAGAGTTGTCTGGACT
CTATGCATGCATATATAAAGCCTTTATTTCACTCATCATGTTGAGATAAAAGTCCACAGCTTTCGTCCTATGGAAACTTCACCAGG
ATGCTCAACCTCCTCTTCATCTTCAGAATCAGCGTCCTCCTCATCATCATCCTCCTCCTGGGCAGCTGCAGGAGTTCCAAGCTCTT
GATCATCATTGTGATGCTCCTTATTCTGTTGAGGTGTCCCGTTGACTTCTTCGCTCAAAGCCATATCTTCTACACTCTTGTTTGCT
ACCTCATTCTCCCCATCTACATTATTATGGGCTTGCGAGTCTATGTCATGATCTCCATTTGCAGAAGCTGTTGAAGCTCCAGGCTG
AACCTTTGAAGAGCCACGGGATCTTCTCTTTCTCCCAGCAACACCATTCTCTTTATTTGTGAGGCCGTCAGCCCCATCTTCTTTAC
TTTGATTAGACAGGGTTCCGTTAACAGCCGTGGGGCCTCCAGTCTTTCGGCGTAGGTTGTATCGTGTTACTGGAGGAGCCTCTACA
CCTCTAGCAACTTTCCGCTTCGTGTTCCTGCGACCCCCGGTTGTGACACTGACAGACTGTTCACTGTACTCAGGTTCTTGTACACT
TGCACGTTTACGGCTTTCTGTTTTTCCACCTTTTGATACTCCCTGACTCACTTCATTTGTGTAAGCAGAGTCTTCCGTGACACCAT
TGGCGCTCTCACTTACATTATTGTCACTAGTAGCATTATGATCTCCAACAGCTGCCTTTGTAATACGTGCTCTAGTAGCCCTAGGT
CTAAGCCTCTTAGTCGGCTTACTATTTTCAGGCTGCTGAGGAACTTTCTCAATATCATGTGACTGCTCCACCTGTCTCTTGACATC
ATAAGAATCTGACACAACTCTAGCTGACACTTCTGGTTCATCCTCGGAGCTCAGTATATATTCAGGTATTTCACCAACATCCACAA
GCTTCTCTTGTGCTTCTGTTTCACCAGCTTCATGTTCATTCCTTTTCCCTGCTGAGAATATAGAGATCTTTGAGGTACATTTTTTT
AACCATGTGAGGGTTCCGCCAGAACCAGGAGATCCTGAATTAATCATAGCCATGGAGGTCCCGACATTTGGTCTCTCAGATGTACC
ATGAACAGCTTCCTTCAGATAACTGTCAGATAACTTCGGCAACTGAAAATTATCAGTGTTCTTAATTTCTGCTAAAGATTGAAGAT
CAGACAAGACGAACTCCGAAACTATCTCTCCACAGTCCTTGCAGCCCTTCTGTTTCTCAACAAATGCAATGAACCGTTCACGTTCT
CTAACGAATTGTTCACGCTGGTCCTTCAACTTCATGCTAAGTGAAACGAGCTTATCAATATCGTTTCTCATTCCAAGCTGTTGCCC
TTCTAGATGCTTCTGATTAGCAGATATATCCTGTTTTTCTTTATCTAATTTGATTCTTTCTGATTTCGTCTCTTCCATTTCTCTAC
TTGCAACATCTCTCAAGTATCTCAAATTAGCTAAATCTCTTTCTTTCTCTTCTTCAAATGATTTTTCACGTTCGAGCATGCGGTTC
TCAATCTCAGTTTCTTTGAGTTGCAATTTGGATTCGAGTTCTTGTTTCTTCACTTCAAAATCATGAAGCATTTGGGATTCTTTGCT
GTTGTATTTTTCTGCTAAGACAGATTTCTCGTGCTCCATGTTAGCAGCAAACGATTCTTTGGCCAACTTAAGTGATTCCAACTCTC
TCTCTACATAACTCTCGGTTTCCAACCTCATATTATGCAACTTTTCTTCTTCTAAACGATTCAATTTTTCCATCTTTTCCTTCTGT
GCAGCAAAAGAATCCAGTTCCTTCTGTATCTCAGCTCTTTTTTCATCAAGATCTTCCCACTCTTTTTCGAATTTCTCCTTTTCCAG
CTTCAGATTTTCTCGTTCCGTCAGAACGACTTCCCATTCTTGTCTGTTTTTTTCTATCTCTTGTTTTAATTCAGATTGCAGACGGA
CAAAATCAGACCTTTCTTCTTCTGTTACTTGAAGTTTTTCCCGATCATCATTCAACTTTGATCTTTGTTCTTCAATTTCAATACCT
ATTTTCTCGAGCTCAGCCTTGAGACTCGACAGATTCTCTGTTTCAGTGCTTAGTTCTTTCCTTACTTTGTCTAAGTTCTTCTCCTC
GGCTTTAAGGGACTTTTCTTTCTCCTTTAAAGCCTTTGACTTCAAATCAATATCCTTCTCTTTTTCCTTGATTTTCTCGAGTTTCT
TTTCCAGAGCTTGTTCTCGTTTAGCGATTTTTCCTTCCAAGTGATTGACTTCAATTTCCTTTTTCTCCACTTCAGCGACCTTGATT
TTGAAATCCTCATCCAACGATCTCCTCTTTTGTTCCATCTCCAACTCAAAATCATGTGTTTTCGCATCCAGCATGACCTTGTGCTC
ATCCAGAAGTTTTTGAATCTCTACTTGTTCTCTTGCGTTAAGCTTCTCCTCTAGCTCTAGTAATTCCTTCTCTCTAACCTCTAAGT
TCTTGCTAATAACAGCAGCTTCCTTCTCTTTCAAAGCTAGGTTTTCGATCCTTTTACTAATATCATCTTCTTTACTTTTCAACTCC
AAATTAGCCACATCTATCCGCTTCTGTGCTTCTTCAAGATCAAGTTGTTTCTGTTTAAATACTCTATCACTATCATTCGCAAGCTC
TTCCCTTTGGTTGAGCAGTCGACGAACCTCAGCCAGCTTTTCCTCTCCCTCTTGTAACTTCCTCTCCCATTCTCTTAAGTCCTCCC
TTTGGTTGGCTAAGTTCCGTTCATGTGCATCTCTCTCATTATTAAATGACATGCGCTCTCTCAGGAGTGAACTACTGAAATTGAAC
CATGCCAATGAATCAACCCCACTGTACCTGTGCTCATGTTCATCTTGTACGTGTTCAGCGTGTCCAGGATCAGCTTGTACGTGTTC
ATCTTATAAGTGTTCAGCTTGCACGTGCTCAGTGTATTCGCATTCAGTGGGTTGGCGTTCAGTGTGTTCCCGCTGAACCAACCCAA
CCTGATAACGCAACCCAGCCTGCTGAACCAACCACATAACCATGCC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CAN74990 hypothetical protein VITISV_008657 [Vitis vinifera]10898e-116
NP_176892 protein little nuclei1 [Arabidopsis thaliana]9454e-099
BAI67715 nuclear matrix constituent protein 1 [Apium graveolens]8164e-084
XP_002525969 DNA double-strand break repair rad50 ATPase, putative [Ricinus communis]8146e-084
BAA20407 nuclear matrix constituent protein 1 [Daucus carota]7941e-081

Swiss-Prot top hits (Blast detail)Scoree value
Q9FLH0 Putative nuclear matrix constituent protein 1-like protein6252e-063
Q75JC9 Uncharacterized protein DDB_G02716702075e-015

TrEMBL top hits (Blast detail)Scoree value
F6HSF7 Putative uncharacterized protein14241e-154
B9N1Z9 Predicted protein11982e-128
A5BQE9 Putative uncharacterized protein10933e-116
A5BTD9 Putative uncharacterized protein10899e-116
F6HF26 Putative uncharacterized protein10333e-109

Arabidopsis top hits (Blast detail)Scoree value
AT1G67230.1 LINC1 (LITTLE NUCLEI1)9451e-101
AT1G13220.2 LINC2 (LITTLE NUCLEI2)7918e-084
AT1G68790.1 LINC3 (LITTLE NUCLEI3)5533e-056
AT1G13220.1 LINC2 (LITTLE NUCLEI2)2452e-020
AT5G65770.1 LINC4 (LITTLE NUCLEI4)1313e-007