GenBank blast output of UN93270
BLASTX 7.6.2
Query= UN93270 /QuerySize=835
(834 letters)
Database: GenBank nr;
20,571,509 sequences; 7,061,663,739 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|356573261|ref|XP_003554781.1| PREDICTED: heterogeneous nuclea... 112 1e-022
gi|388509780|gb|AFK42956.1| unknown [Lotus japonicus] 112 1e-022
gi|356506096|ref|XP_003521823.1| PREDICTED: heterogeneous nuclea... 109 7e-022
gi|357512617|ref|XP_003626597.1| RNA-binding protein [Medicago t... 106 1e-020
gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recogn... 106 1e-020
gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putat... 104 2e-020
gi|224130652|ref|XP_002320894.1| predicted protein [Populus tric... 104 3e-020
gi|225453602|ref|XP_002264834.1| PREDICTED: heterogeneous nuclea... 102 1e-019
gi|224068117|ref|XP_002302667.1| predicted protein [Populus tric... 100 4e-019
gi|297814257|ref|XP_002875012.1| RNA recognition motif-containin... 90 4e-016
>gi|356573261|ref|XP_003554781.1| PREDICTED: heterogeneous nuclear
ribonucleoprotein Q-like [Glycine max]
Length = 483
Score = 112 bits (279), Expect = 1e-022
Identities = 59/125 (47%), Positives = 73/125 (58%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ++KK +IPH
Sbjct: 326 IHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQADKKPDGGYAYNPGLHPNHIPHPAYG 385
Query: 583 XXXXXXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPA 404
V QQPMIYGRGP+P GMQMVPMVLPDG+IGYVLQQPG Q+PA
Sbjct: 386 NFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPA 445
Query: 403 VRPSR 389
RP R
Sbjct: 446 TRPRR 450
>gi|388509780|gb|AFK42956.1| unknown [Lotus japonicus]
Length = 232
Score = 112 bits (279), Expect = 1e-022
Identities = 61/128 (47%), Positives = 78/128 (60%), Gaps = 2/128 (1%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ+EK+ ++PHA
Sbjct: 78 IHFAERSSALKAVKETEKYEIDGQVLEVVLAKPQAEKR-PDAYAFNPGVHPNHLPHAGYG 136
Query: 583 XXXXXXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPA 404
P+ QQPM+YGRGP+P GMQMVPMVLPDG+IGYVLQQPG Q+PA
Sbjct: 137 SYSGNPYGSLGTGYGAAPAYQQPMMYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPA 196
Query: 403 VRPSRRNE 380
RP RRNE
Sbjct: 197 ARP-RRNE 203
>gi|356506096|ref|XP_003521823.1| PREDICTED: heterogeneous nuclear
ribonucleoprotein Q-like [Glycine max]
Length = 483
Score = 109 bits (272), Expect = 7e-022
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ++KK ++PH
Sbjct: 326 IHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQADKKPDGGYAYNPGLHPNHVPHPAYG 385
Query: 583 XXXXXXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPA 404
V QQPMIYGRGP+P GMQMVPM+LPDG+IGYVLQQPG Q+P
Sbjct: 386 NFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAGMQMVPMMLPDGRIGYVLQQPGVQVPP 445
Query: 403 VRPSRRNE 380
RP RRN+
Sbjct: 446 ARP-RRND 452
>gi|357512617|ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
Length = 479
Score = 106 bits (262), Expect = 1e-020
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ+EKK ++PH
Sbjct: 325 IHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDGGYAYNPGLHPNHLPHPGYG 384
Query: 583 XXXXXXXXXXXXXXXV--NPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQM 410
V + QQPMIYGRGP+P GMQMVPMVLPDG+IGYVLQQPG Q+
Sbjct: 385 NFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQV 444
Query: 409 PAVRPSRRNE 380
P RP RRN+
Sbjct: 445 PGPRP-RRND 453
>gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);
Calcium-binding EF-hand [Medicago truncatula]
Length = 559
Score = 106 bits (262), Expect = 1e-020
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ+EKK ++PH
Sbjct: 405 IHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDGGYAYNPGLHPNHLPHPGYG 464
Query: 583 XXXXXXXXXXXXXXXV--NPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQM 410
V + QQPMIYGRGP+P GMQMVPMVLPDG+IGYVLQQPG Q+
Sbjct: 465 NFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQV 524
Query: 409 PAVRPSRRNE 380
P RP RRN+
Sbjct: 525 PGPRP-RRND 533
>gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus
communis]
Length = 557
Score = 104 bits (259), Expect = 2e-020
Identities = 53/110 (48%), Positives = 64/110 (58%)
Frame = -3
Query: 718 SKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXXXXXXXXXXXXXXXXX 539
+++ +IDGQ LEVV AKPQ++KK ++ H
Sbjct: 315 NEKYQIDGQVLEVVLAKPQTDKKPDGVYPYPAALHPSHVTHPAYGGFAGNPYSSLGGGFG 374
Query: 538 VNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPAVRPSR 389
V S QQP+IYGRGP+P GM MVPMVLPDG+IGYVLQQPG QMP RP R
Sbjct: 375 VASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRR 424
>gi|224130652|ref|XP_002320894.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 104 bits (258), Expect = 3e-020
Identities = 56/125 (44%), Positives = 70/125 (56%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ LEVV AKPQ++KK +P
Sbjct: 327 IHYAERSSALKAVRDAEKYEIDGQVLEVVLAKPQADKKPDAAYPYNAGVHPNPVPLPAYS 386
Query: 583 XXXXXXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPA 404
V S QQP+IYGRGP+P GM MVPMVLPDG+IGYVLQQPG QMP
Sbjct: 387 GFAGNPYGSLGTGFGVASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQ 446
Query: 403 VRPSR 389
RP R
Sbjct: 447 PRPRR 451
>gi|225453602|ref|XP_002264834.1| PREDICTED: heterogeneous nuclear
ribonucleoprotein Q [Vitis vinifera]
Length = 476
Score = 102 bits (252), Expect = 1e-019
Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = -3
Query: 763 LNIIRRYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXX 584
++ R +++A +++ EIDGQ L+V AKPQS+KK ++PH
Sbjct: 322 IHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQSDKK-FEGVHPYSSGHPNFLPHPGYG 380
Query: 583 XXXXXXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPA 404
V+ QQP+IYGRGP+P GM MVPMVLPDG+IGYVLQQPG QMP
Sbjct: 381 GFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPP 440
Query: 403 VRPSRRNE 380
RP RRNE
Sbjct: 441 PRP-RRNE 447
>gi|224068117|ref|XP_002302667.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 100 bits (248), Expect = 4e-019
Identities = 54/115 (46%), Positives = 64/115 (55%)
Frame = -3
Query: 733 QAQFYSKQCEIDGQYLEVVFAKPQSEKKXXXXXXXXXXXXXXYIPHAVXXXXXXXXXXXX 554
QA +++ EIDGQ LEVV AKPQ++KK +P
Sbjct: 251 QAVRDTEKYEIDGQLLEVVLAKPQADKKPDGSYPYNAGVNPNPVPLPAYSGFAGNPHGSL 310
Query: 553 XXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPAVRPSR 389
V QQP+IYGRGP+P GM MVPMVLPDG+IGYVLQQPG QMP +P R
Sbjct: 311 GTGFGVAAGFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPQPRR 365
>gi|297814257|ref|XP_002875012.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 494
Score = 90 bits (222), Expect = 4e-016
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = -3
Query: 748 RYISIQAQFYSKQCEIDGQYLEVVFAKPQSEKKXX-XXXXXXXXXXXXYIPHAVXXXXXX 572
R +++A +++ E++GQ LEVV AKPQ+E+K H
Sbjct: 340 RSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSYSYGAAPNPAPFVHPTFGGFAA 399
Query: 571 XXXXXXXXXXXVNPSLQQPMIYGRGPVPGGMQMVPMVLPDGQIGYVLQQPGAQMPAVRPS 392
+ S QPMIYGRG +P GMQMVPM+LPDG++GYVLQQPG QM A P+
Sbjct: 400 APYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMQMAAAPPA 459
Query: 391 R 389
R
Sbjct: 460 R 460
Database: GenBank nr
Posted date: Thu Sep 27 19:07:00 2012
Number of letters in database: 7,061,663,739
Number of sequences in database: 20,571,509
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,405,029,558,915
Number of Sequences: 20571509
Number of Extensions: 6405029558915
Number of Successful Extensions: 1651106151
Number of sequences better than 0.0: 0
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