SwissProt blast output of UN84972
BLASTX 7.6.2
Query= UN84972 /QuerySize=1503
(1502 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q84L30|RD23D_ARATH Putative DNA repair protein RAD23-4 OS=Ara... 430 2e-119
sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza... 349 5e-095
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara... 307 2e-082
sp|Q84L32|RD23B_ARATH Putative DNA repair protein RAD23-2 OS=Ara... 181 1e-044
sp|Q84L33|RD23A_ARATH Putative DNA repair protein RAD23-1 OS=Ara... 181 2e-044
sp|Q29RK4|RD23B_BOVIN UV excision repair protein RAD23 homolog B... 73 4e-012
sp|P54727|RD23B_HUMAN UV excision repair protein RAD23 homolog B... 73 4e-012
sp|Q4KMA2|RD23B_RAT UV excision repair protein RAD23 homolog B O... 73 6e-012
sp|P54728|RD23B_MOUSE UV excision repair protein RAD23 homolog B... 72 8e-012
>sp|Q84L30|RD23D_ARATH Putative DNA repair protein RAD23-4 OS=Arabidopsis
thaliana GN=RAD23-4 PE=2 SV=2
Length = 378
Score = 430 bits (1104), Expect = 2e-119
Identities = 238/389 (61%), Positives = 254/389 (65%), Gaps = 12/389 (3%)
Frame = -1
Query: 1412 MKVFVKTLKGTHFEIEVKPQDTVADVKKNIETVQGDVYPAAQQMLIHQGKVLKDTTTLEE 1233
MK+FVKTL G++FEIEVKP D V+DVK IETV+G YPAA+QMLIHQGKVLKD TTLEE
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 1232 NKVADSSFIVIMLSKSKAAPSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1053
N V ++SFIVIMLSK+KA+PSG
Sbjct: 61 NNVVENSFIVIMLSKTKASPSG-------ASTASAPAPSATQPQTVATPQVSAPTASVPV 113
Query: 1052 XXXXXXXXXXXXXXXXXXXXXYDQAASNLVAGSNLEGTVQHLLDMGGGIWDRDTVVRALR 873
Y QAASNLVAG+ LE TVQ +LDMGGG WDRDTVVRALR
Sbjct: 114 PTSGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALR 173
Query: 872 AAFNNPERAVEYLYSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNA 693
AAFNNPERAVEYLYSGI NA
Sbjct: 174 AAFNNPERAVEYLYSGI--PAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGGPNA 231
Query: 692 NPLDLFPQGLPDMXXXXXXXXXXXLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNP 513
NPL+LFPQG+P LDFLRNS QFQALRAMVQANPQILQPMLQELGKQNP
Sbjct: 232 NPLNLFPQGMP---AADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP 288
Query: 512 HLVRLIQEHQADFLRLINEPVEGGENVLGDLGAAMPQAVTVTPEEREAIERLEAMGFDRA 333
LVRLIQEHQADFLRLINEPVEG ENV+ L AAMPQAVTVTPEEREAIERLE MGFDRA
Sbjct: 289 QLVRLIQEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRA 348
Query: 332 LVLEVFFACNKNEELAANYLLDHMHEFED 246
+VLEVFFACNKNEELAANYLLDHMHEFED
Sbjct: 349 MVLEVFFACNKNEELAANYLLDHMHEFED 377
>sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza sativa subsp.
japonica GN=RAD23 PE=1 SV=2
Length = 392
Score = 349 bits (893), Expect = 5e-095
Identities = 199/394 (50%), Positives = 234/394 (59%), Gaps = 11/394 (2%)
Frame = -1
Query: 1412 MKVFVKTLKGTHFEIEVKPQDTVADVKKNIETVQGD-VYPAAQQMLIHQGKVLKDTTTLE 1236
MK+ VKTLKG+ F+IEV VADVK+ IET QG +YPA QQMLIHQGKVLKD TTL+
Sbjct: 1 MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60
Query: 1235 ENKVADSSFIVIMLSKSKAAPSGEXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXX 1062
ENKV ++SF+VIML + K + S
Sbjct: 61 ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVT 120
Query: 1061 XXXXXXXXXXXXXXXXXXXXXXXXYDQAASNLVAGSNLEGTVQHLLDMGGGIWDRDTVVR 882
Y QA SNLVAGSNLE T+Q +L+MGGGIWDRD V+
Sbjct: 121 VSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLH 180
Query: 881 ALRAAFNNPERAVEYLYSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 702
AL AAFNNPERAVEYLYSG+
Sbjct: 181 ALSAAFNNPERAVEYLYSGV----PEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSG 236
Query: 701 XNANPLDLFPQGLPDMXXXXXXXXXXXLDFLRNSPQFQALRAMVQANPQILQPMLQELGK 522
NA+PLDLFPQ LP+ LD LRN+ QF+ L ++VQANPQILQP+LQELGK
Sbjct: 237 PNASPLDLFPQALPN--ASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGK 294
Query: 521 QNPHLVRLIQEHQADFLRLINEPVEGG--ENVLGDLGAAMPQAVTVTPEEREAIERLEAM 348
QNP +++LIQE+QA+FL LINEP EG EN+L AMPQ + VTPEE EAI RLEAM
Sbjct: 295 QNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAM 354
Query: 347 GFDRALVLEVFFACNKNEELAANYLLDHMHEFED 246
GFDRALVL+VFFACNK+E+LAANYLLDHM+EF+D
Sbjct: 355 GFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
>sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Arabidopsis
thaliana GN=RAD23-3 PE=2 SV=2
Length = 419
Score = 307 bits (784), Expect = 2e-082
Identities = 168/253 (66%), Positives = 183/253 (72%), Gaps = 12/253 (4%)
Frame = -1
Query: 989 YDQAASNLVAGSNLEGTVQHLLDMGGGIWDRDTVVRALRAAFNNPERAVEYLYSGIXXXX 810
Y QAASNL AGSNLE T+Q +LDMGGG WDR+TVV ALRAAFNNPERAVEYLY+GI
Sbjct: 174 YGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGI---- 229
Query: 809 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNANPLDLFPQGLPDMXXXXXXXX 630
NANPLDLFPQGLP++
Sbjct: 230 PEQAEVPPVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV---GGNPG 286
Query: 629 XXXLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPV 450
LDFLRNS QFQALRAMVQANPQ+LQPMLQELGKQNP+L+RLIQ+HQADFLRLINEPV
Sbjct: 287 AGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPV 346
Query: 449 EGG---ENVLGDLGAAM--PQAVTVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELA 285
EGG N+LG + A M PQA+ VT EEREAIERLEAMGF+RALVLEVFFACNKNEELA
Sbjct: 347 EGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELA 406
Query: 284 ANYLLDHMHEFED 246
ANYLLDHMHEFE+
Sbjct: 407 ANYLLDHMHEFEE 419
Score = 133 bits (333), Expect = 5e-030
Identities = 66/80 (82%), Positives = 76/80 (95%), Gaps = 1/80 (1%)
Frame = -1
Query: 1412 MKVFVKTLKGTHFEIEVKPQDTVADVKKNIETVQG-DVYPAAQQMLIHQGKVLKDTTTLE 1236
MK+FVKTLKGTHFEIEVKP+D+V DVKKNIE+VQG DVYPAA+QMLIHQGKVLKD TT+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 1235 ENKVADSSFIVIMLSKSKAA 1176
ENKVA++SFIVIM++KSK A
Sbjct: 61 ENKVAENSFIVIMMNKSKPA 80
>sp|Q84L32|RD23B_ARATH Putative DNA repair protein RAD23-2 OS=Arabidopsis
thaliana GN=RAD23-2 PE=2 SV=2
Length = 368
Score = 181 bits (459), Expect = 1e-044
Identities = 91/154 (59%), Positives = 116/154 (75%), Gaps = 6/154 (3%)
Frame = -1
Query: 698 NANPLDLFPQGLPDMXXXXXXXXXXXLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQ 519
N++PLDLFPQ + L+FLR + QFQ LR+MV +NPQILQPMLQELGKQ
Sbjct: 218 NSSPLDLFPQ---EAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQ 274
Query: 518 NPHLVRLIQEHQADFLRLINEPVEGGE---NVLGDLGAAMPQAVTVTPEEREAIERLEAM 348
NP L+RLIQE+QA+FL+L+NEP EG + ++ MP +V VTPEE+E+IERLEAM
Sbjct: 275 NPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAM 334
Query: 347 GFDRALVLEVFFACNKNEELAANYLLDHMHEFED 246
GFDRA+V+E F +C++NEELAANYLL+H +FED
Sbjct: 335 GFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368
Score = 87 bits (213), Expect = 4e-016
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = -1
Query: 989 YDQAASNLVAGSNLEGTVQHLLDMGGGIWDRDTVVRALRAAFNNPERAVEYLYSGI 822
Y QAAS LV+GS++E VQ +++MGGG WD++TV RALRAA+NNPERAV+YLYSGI
Sbjct: 133 YGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGI 188
>sp|Q84L33|RD23A_ARATH Putative DNA repair protein RAD23-1 OS=Arabidopsis
thaliana GN=RAD23-1 PE=2 SV=3
Length = 371
Score = 181 bits (458), Expect = 2e-044
Identities = 94/155 (60%), Positives = 116/155 (74%), Gaps = 8/155 (5%)
Frame = -1
Query: 698 NANPLDLFPQGLPDMXXXXXXXXXXXLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQ 519
N++PLDLFPQ + L+FLRN+ QFQ LR MV +NPQILQPMLQELGKQ
Sbjct: 221 NSSPLDLFPQ---ETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQ 277
Query: 518 NPHLVRLIQEHQADFLRLINEPVEGGENVLGDL----GAAMPQAVTVTPEEREAIERLEA 351
NP L+RLIQE+QA+FL+L+NEP EG + GD+ MP A+ VTP E+EAI+RLEA
Sbjct: 278 NPQLLRLIQENQAEFLQLVNEPYEGSDGE-GDMFDQPEQEMPHAINVTPAEQEAIQRLEA 336
Query: 350 MGFDRALVLEVFFACNKNEELAANYLLDHMHEFED 246
MGFDRALV+E F AC++NEELAANYLL++ +FED
Sbjct: 337 MGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371
Score = 87 bits (215), Expect = 2e-016
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = -1
Query: 989 YDQAASNLVAGSNLEGTVQHLLDMGGGIWDRDTVVRALRAAFNNPERAVEYLYSGI 822
Y QAAS LV+GS+LE VQ +++MGGG WD++TV RALRAA+NNPERAV+YLYSGI
Sbjct: 135 YGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGI 190
>sp|Q29RK4|RD23B_BOVIN UV excision repair protein RAD23 homolog B OS=Bos taurus
GN=RAD23B PE=2 SV=1
Length = 408
Score = 73 bits (178), Expect = 4e-012
Identities = 32/71 (45%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -1
Query: 620 LDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPVE-- 447
L+FLRN PQFQ +R ++Q NP +L +LQ++G++NP L++ I +HQ F++++NEPV+
Sbjct: 275 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEA 334
Query: 446 GGENVLGDLGA 414
GG+ G G+
Sbjct: 335 GGQGGGGGGGS 345
>sp|P54727|RD23B_HUMAN UV excision repair protein RAD23 homolog B OS=Homo
sapiens GN=RAD23B PE=1 SV=1
Length = 409
Score = 73 bits (178), Expect = 4e-012
Identities = 32/71 (45%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -1
Query: 620 LDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPVE-- 447
L+FLRN PQFQ +R ++Q NP +L +LQ++G++NP L++ I +HQ F++++NEPV+
Sbjct: 276 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEA 335
Query: 446 GGENVLGDLGA 414
GG+ G G+
Sbjct: 336 GGQGGGGGGGS 346
Score = 70 bits (171), Expect = 3e-011
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Frame = -1
Query: 584 LRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPVEGGENVLGDLGAAMP 405
L+ + + NPQ +LQ++ + H ++++ E + GG + + G+
Sbjct: 303 LQQIGRENPQ----LLQQISQHQEHFIQMLNEPVQE-AGGQGGGGGGGSGGIAEAGSGHM 357
Query: 404 QAVTVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLL 270
+ VTP+E+EAIERL+A+GF LV++ +FAC KNE LAAN+LL
Sbjct: 358 NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 402
>sp|Q4KMA2|RD23B_RAT UV excision repair protein RAD23 homolog B OS=Rattus
norvegicus GN=Rad23b PE=1 SV=1
Length = 415
Score = 73 bits (177), Expect = 6e-012
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 620 LDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPVE-- 447
L+FLRN PQFQ +R ++Q NP +L +LQ++G++NP L++ I +HQ F++++NEPV+
Sbjct: 276 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEA 335
Query: 446 GGE 438
GG+
Sbjct: 336 GGQ 338
>sp|P54728|RD23B_MOUSE UV excision repair protein RAD23 homolog B OS=Mus
musculus GN=Rad23b PE=1 SV=2
Length = 416
Score = 72 bits (176), Expect = 8e-012
Identities = 28/58 (48%), Positives = 46/58 (79%)
Frame = -1
Query: 620 LDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLVRLIQEHQADFLRLINEPVE 447
L+FLRN PQFQ +R ++Q NP +L +LQ++G++NP L++ I +HQ F++++NEPV+
Sbjct: 276 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQ 333
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,824,447,855
Number of Sequences: 537505
Number of Extensions: 148824447855
Number of Successful Extensions: 892300400
Number of sequences better than 0.0: 0
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