Chrysanthenum transcriptome database

Arabidopsis blast output of UN84708


BLASTX 7.6.2

Query= UN84708 /QuerySize=789
        (788 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G13870.1 | Symbols: RHD3 | RHD3 (ROOT HAIR DEF...    251   5e-067
TAIR9_protein||AT5G45160.1 | Symbols:  | root hair defective 3 G...    237   6e-063
TAIR9_protein||AT1G72960.1 | Symbols:  | root hair defective 3 G...    191   4e-049
TAIR9_protein||AT3G13870.2 | Symbols: RHD3 | RHD3 (ROOT HAIR DEF...    144   6e-035
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ...     83   2e-016

>TAIR9_protein||AT3G13870.1 | Symbols: RHD3 | RHD3 (ROOT HAIR DEFECTIVE 3); GTP
        binding | chr3:4565762-4571109 REVERSE

          Length = 803

 Score =  251 bits (639), Expect = 5e-067
 Identities = 121/139 (87%), Positives = 128/139 (92%)
 Frame = -1

Query: 695 CSTHLIEGDGTFNGVGLDNFIKQVKLAECGLSYDVVAIMGPQSSGKSTLLNHLFYTNFRE 516
           CST LI+GDG FN  G+D+FIK+VKL ECGLSY VV+IMGPQSSGKSTLLNHLF TNFRE
Sbjct:   5 CSTQLIDGDGVFNVSGVDHFIKEVKLDECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFRE 64

Query: 515 MDAYRGRSQTTKGIWIARCPGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDI 336
           MDA+RGRSQTTKGIWIARC GIEPCT+VMDLEGTDGRERGEDDTAFEKQSALFALAVSDI
Sbjct:  65 MDAFRGRSQTTKGIWIARCAGIEPCTVVMDLEGTDGRERGEDDTAFEKQSALFALAVSDI 124

Query: 335 VLINMWCHDIGREQANRVP 279
           VLINMWCHDIGREQA   P
Sbjct: 125 VLINMWCHDIGREQAANKP 143

>TAIR9_protein||AT5G45160.1 | Symbols:  | root hair defective 3 GTP-binding
        (RHD3) family protein | chr5:18264991-18270035 FORWARD

          Length = 835

 Score =  237 bits (604), Expect = 6e-063
 Identities = 114/146 (78%), Positives = 127/146 (86%)
 Frame = -1

Query: 716 MNKEAECCSTHLIEGDGTFNGVGLDNFIKQVKLAECGLSYDVVAIMGPQSSGKSTLLNHL 537
           M +  + CST LI+G+G FN  GLDNF+K+ KL++CGLSY VVAIMGPQSSGKSTLLNHL
Sbjct:   1 MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHL 60

Query: 536 FYTNFREMDAYRGRSQTTKGIWIARCPGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 357
           F T+FREMDA+ GRSQTTKGIW+ARC GIEP TI MDLEGTDGRERGEDDT FEKQSALF
Sbjct:  61 FKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALF 120

Query: 356 ALAVSDIVLINMWCHDIGREQANRVP 279
           A+AV+DIVLINMWCHDIGREQA   P
Sbjct: 121 AIAVADIVLINMWCHDIGREQAANKP 146

>TAIR9_protein||AT1G72960.1 | Symbols:  | root hair defective 3 GTP-binding
        (RHD3) family protein | chr1:27446734-27450862 FORWARD

          Length = 749

 Score =  191 bits (485), Expect = 4e-049
 Identities = 90/101 (89%), Positives = 95/101 (94%)
 Frame = -1

Query: 581 MGPQSSGKSTLLNHLFYTNFREMDAYRGRSQTTKGIWIARCPGIEPCTIVMDLEGTDGRE 402
           MGPQSSGKSTLLNHLF TNF EMDA++GRSQTTKGIW+ARC GIEPCT+VMDLEGTDGRE
Sbjct:   1 MGPQSSGKSTLLNHLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 60

Query: 401 RGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQANRVP 279
           RGEDDTAFEKQSALFALA+SDIVLINMWCHDIGREQA   P
Sbjct:  61 RGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKP 101

>TAIR9_protein||AT3G13870.2 | Symbols: RHD3 | RHD3 (ROOT HAIR DEFECTIVE 3); GTP
        binding | chr3:4565762-4570261 REVERSE

          Length = 739

 Score =  144 bits (363), Expect = 6e-035
 Identities = 69/79 (87%), Positives = 70/79 (88%)
 Frame = -1

Query: 515 MDAYRGRSQTTKGIWIARCPGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDI 336
           M    G SQTTKGIWIARC GIEPCT+VMDLEGTDGRERGEDDTAFEKQSALFALAVSDI
Sbjct:   1 MHLEEGMSQTTKGIWIARCAGIEPCTVVMDLEGTDGRERGEDDTAFEKQSALFALAVSDI 60

Query: 335 VLINMWCHDIGREQANRVP 279
           VLINMWCHDIGREQA   P
Sbjct:  61 VLINMWCHDIGREQAANKP 79

>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
        THALIANA HIGH MOBILITY GROUP); transcription factor |
        chr3:10784954-10788498 FORWARD

          Length = 647

 Score =  83 bits (203), Expect = 2e-016
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -3

Query: 246 VYSSGVLWKKQGGGKAVEVDKSDILGLTWMKVPRTNQLSVRTKDALKYKFTGLRDQ 79
           + S G+ WKKQGGGKAVEVD+SDI+ ++W KV ++NQL V+TKD L YKF G RDQ
Sbjct:  25 INSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFVGFRDQ 80

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,232,421,419
Number of Sequences: 33410
Number of Extensions: 17232421419
Number of Successful Extensions: 753007613
Number of sequences better than 0.0: 0