Arabidopsis blast output of UN79927
BLASTX 7.6.2
Query= UN79927 /QuerySize=1838
(1837 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 297 3e-080
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 296 3e-080
TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport facto... 182 9e-046
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 119 6e-027
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 116 8e-026
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 112 9e-025
TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport facto... 110 3e-024
TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport facto... 108 1e-023
TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport facto... 108 1e-023
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 94 3e-019
TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport facto... 86 7e-017
TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport facto... 86 7e-017
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 297 bits (758), Expect = 3e-080
Identities = 183/394 (46%), Positives = 232/394 (58%), Gaps = 30/394 (7%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VG AFV QYY ILH SP LVHRFYQD S L RP+ G+++ TTM IN KI+SL Y ++
Sbjct: 15 VGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDKILSLKYEDY 74
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
AEI++ DAQES GV VLV G LTG DNV +KF+QSFFLAPQDKGYFVLND+FR++E
Sbjct: 75 TAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRFLEE 134
Query: 1319 ASHNEGSIAPAV-----DVEAPVDPEQVAKSDPVLENHTPVEVAVTTEEPQAEVVSNLXX 1155
+ + + DV+AP++PE+V S E E + EE + V+ +
Sbjct: 135 KEVTAQARSVPINGTTRDVQAPIEPERVVVSH---EPEVEPEPVASIEEEDLDNVAEVYD 191
Query: 1154 XXXXXXXXXXXXXXXXXXXXXXXSQLVAESNTKIEEVPKKSYASIVLAMKQNAVPFSSPV 975
+++++ + PK SYASI+ MK SSP
Sbjct: 192 PSDKDEGVVVDVEPIEPPTQISHNEILSVPQ---GDAPKHSYASILKQMK------SSPA 242
Query: 974 PAPRKAQPRKQEQQVN---NVPPTASAIEAAASNVDAVENGIHED-EADGYSIYIKGLPM 807
P A+ + + VN PP A AS + V N H D E DG+SIY++ LP
Sbjct: 243 PTTHVARNKPRPAPVNQKLTAPPAEPAARPEASAHENVPNSSHVDVEDDGHSIYVRNLPF 302
Query: 806 SATPAMLDDEFKKFGTIKPNGIQVRSNR-GFCFGFVEFETPEAVQKAIEASPVTIGGRAA 630
+TP L++ FK FG IK GIQVRSN+ GFCFGFVEFET Q A+EASPVTIG R A
Sbjct: 303 DSTPTQLEEVFKNFGAIKHEGIQVRSNKQGFCFGFVEFETSSGKQSALEASPVTIGDRQA 362
Query: 629 VVEEKRSTNSKGG------RGRFPAGRGSGYRNE 546
VVEEK+ TNS+GG RGR+ +GRGS +RNE
Sbjct: 363 VVEEKK-TNSRGGGNNGGSRGRYFSGRGS-FRNE 394
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 296 bits (757), Expect = 3e-080
Identities = 183/395 (46%), Positives = 232/395 (58%), Gaps = 31/395 (7%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VG AFV QYY ILH SP LVHRFYQD S L RP+ G+++ TTM IN KI+SL Y ++
Sbjct: 15 VGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDKILSLKYEDY 74
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
AEI++ DAQES GV VLV G LTG DNV +KF+QSFFLAPQDKGYFVLND+FR++E
Sbjct: 75 TAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRFLEE 134
Query: 1319 ASHNEGSIAPAV-----DVEAPVDPEQVAKSDPVLENHTPVEVAVTTEEPQAEVVSNLXX 1155
+ + + DV+AP++PE+V S E E + EE + V+ +
Sbjct: 135 KEVTAQARSVPINGTTRDVQAPIEPERVVVSH---EPEVEPEPVASIEEEDLDNVAEVYD 191
Query: 1154 XXXXXXXXXXXXXXXXXXXXXXXSQLVAESNTKIEEVPKKSYASIVLAMKQNAVPFSSPV 975
+++++ + PK SYASI+ MK SSP
Sbjct: 192 PSDKDEGVVVDVEPIEPPTQISHNEILSVPQ---GDAPKHSYASILKQMK------SSPA 242
Query: 974 PAPRKAQPRKQEQQVN---NVPPTASAIEAAASNVDAVENGIHED-EADGYSIYIKGLPM 807
P A+ + + VN PP A AS + V N H D E DG+SIY++ LP
Sbjct: 243 PTTHVARNKPRPAPVNQKLTAPPAEPAARPEASAHENVPNSSHVDVEDDGHSIYVRNLPF 302
Query: 806 SATPAMLDDEFKKFGTIKPNGIQVRSNR--GFCFGFVEFETPEAVQKAIEASPVTIGGRA 633
+TP L++ FK FG IK GIQVRSN+ GFCFGFVEFET Q A+EASPVTIG R
Sbjct: 303 DSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGKQSALEASPVTIGDRQ 362
Query: 632 AVVEEKRSTNSKGG------RGRFPAGRGSGYRNE 546
AVVEEK+ TNS+GG RGR+ +GRGS +RNE
Sbjct: 363 AVVEEKK-TNSRGGGNNGGSRGRYFSGRGS-FRNE 395
>TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:9157161-9159362 REVERSE
Length = 489
Score = 182 bits (460), Expect = 9e-046
Identities = 98/182 (53%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Frame = -3
Query: 1082 QLVAESNTKIEEVPKKSYASIVLAMKQNAVPFSSPVPAPRKAQPRKQEQQVNNVP-PT-A 909
Q V ES+++ E+PK+SYASIV MK+NA P S+ P K +P+KQE Q ++P PT
Sbjct: 229 QKVGESDSRTGEIPKRSYASIVKVMKENAAPMSAS-RTPTKVEPKKQEDQAIHIPLPTPL 287
Query: 908 SAIEAAASNVDAVENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRS 729
S + +NV EN + A G SIY+KGLP+ ATPA+L++EF+KFG I+ NGIQVRS
Sbjct: 288 SEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS 347
Query: 728 NRGFCFGFVEFETPEAVQKAIEASPVTIGGRAAVVEEKRSTNSKGGRGRFPAGRGSGYRN 549
+GFCFGFVEFE+ ++Q AIEASPV + G VVEEKRST RGR G +GYRN
Sbjct: 348 QKGFCFGFVEFESASSMQSAIEASPVMLNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRN 407
Query: 548 EG 543
EG
Sbjct: 408 EG 409
Score = 170 bits (429), Expect = 4e-042
Identities = 85/142 (59%), Positives = 106/142 (74%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VGNAFV QYY ILH SP VHRFYQ+ISKLGRPEE+G MS+T+T+ I+ KI++L Y
Sbjct: 19 VGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMALGYGVI 78
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
AEI +VD QES GG VLV G LTGKD+V R F+Q+FFLAPQ+ GYFVLNDMFR+++
Sbjct: 79 SAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDE 138
Query: 1319 ASHNEGSIAPAVDVEAPVDPEQ 1254
+ G+ P +V+APV+ Q
Sbjct: 139 GTVVHGNQIPVNNVQAPVNTYQ 160
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 119 bits (298), Expect = 6e-027
Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 5/168 (2%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
+GN+FV +YY +L+ SPS VH+FY D S LGRP DG M ++ IN +I+S +Y
Sbjct: 15 IGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLKAINEQIMSFDYEIS 74
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
+ +I + D+Q S GV LV GLLT K+ +F+QSFFL P + YFVLND+FRYV +
Sbjct: 75 KIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNGSYFVLNDVFRYVAD 134
Query: 1319 ASHNEGSIAPAVDVEAPVDPEQVAKSDPVLENHTPVEVAVTTEEPQAE 1176
+ V+ P + + D V E V + T++P+A+
Sbjct: 135 EIVEPEANKKEVEEVIPQVVQPTEQVDEVAE-----PVTIPTQQPEAK 177
Score = 108 bits (269), Expect = 1e-023
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Frame = -3
Query: 1049 EVPKKSYASIVLAMKQNAVPFSSPVPAPRKAQPRKQEQQVNNVPPTASAIEAAASNVDAV 870
+ PKKS+A IV + QN F++ KA P K + + P A +A A +
Sbjct: 212 DAPKKSFAHIVQDLAQNGATFNA------KASPAKPKSKPVTKPSAARESKAPAPVSEHS 265
Query: 869 ENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNR--GFCFGFVEF 696
+ +A+GY+I++ L M ATP L++ FK FG I +GIQVRS R G CFGFV F
Sbjct: 266 SAATIDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKGNCFGFVTF 325
Query: 695 ETPEAVQKAIEA---SPVTIGGRAAVVEEKRSTNSKGGRGRFPAGRGSGYRNE 546
+ EAV+ ++A S + IG R +EEKR N G PA R GYRN+
Sbjct: 326 ASAEAVKLVLQAHKESAIRIGNRRVSIEEKRGNNDNGR----PAMRNGGYRND 374
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 116 bits (288), Expect = 8e-026
Identities = 93/303 (30%), Positives = 139/303 (45%), Gaps = 13/303 (4%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VGN FV +YY L+ S S VH+FY + S + RP DG + ++ IN +I+S++Y
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDYKSS 74
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
R EI + D+Q +L GV LV GL+ G D RKF+QSFFL ++ YFVLND FRYV
Sbjct: 75 RIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYV-- 132
Query: 1319 ASHNEGSIAPAVDVEAPVDPEQVAKSDPVLENHTPVEV---AVTTEEPQAEVVSNLXXXX 1149
++ + P E A ++P E+ V V A TT A + N
Sbjct: 133 ---SDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTEAKTTVTKPASAIPNGHAKV 189
Query: 1148 XXXXXXXXXXXXXXXXXXXXXSQLVAESNTKIEEVPKKSYASI-VLAMKQNAVPFSSPVP 972
++ +S I + +S ++ V A P PV
Sbjct: 190 PEEKVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQVKASPVKRKPVEKPVA 249
Query: 971 AP-RKA-QPRKQEQQVNNVPPTA--SAIEAAASNVDAVENGIHEDEADGYSIYIKGLPMS 804
AP RKA P +++ ++ P A S+I A +DA ++E +I G+ +
Sbjct: 250 APERKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVR 309
Query: 803 ATP 795
+ P
Sbjct: 310 SYP 312
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 112 bits (279), Expect = 9e-025
Identities = 88/300 (29%), Positives = 136/300 (45%), Gaps = 6/300 (2%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VGN FV +YY L+ S S VH+FY + S + RP DG + ++ IN +I+S++Y
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDYKSS 74
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
R EI + D+Q +L GV LV GL+ G D RKF+QSFFL ++ YFVLND FRYV +
Sbjct: 75 RIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSD 134
Query: 1319 ASHNEGSIAPAVDVEAPVDPEQVAKSDPVLENHTPVEVAVTTEEPQAEVVSNLXXXXXXX 1140
+ + ++ ++ V P E T +P A + N
Sbjct: 135 EFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTEAKTTVTKP-ASAIPNGHAKVPEE 193
Query: 1139 XXXXXXXXXXXXXXXXXXSQLVAESNTKIEEVPKKSYASI-VLAMKQNAVPFSSPVPAP- 966
++ +S I + +S ++ V A P PV AP
Sbjct: 194 KVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQVKASPVKRKPVEKPVAAPE 253
Query: 965 RKA-QPRKQEQQVNNVPPTA--SAIEAAASNVDAVENGIHEDEADGYSIYIKGLPMSATP 795
RKA P +++ ++ P A S+I A +DA ++E +I G+ + + P
Sbjct: 254 RKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYP 313
>TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:19727279-19729533 FORWARD
Length = 459
Score = 110 bits (274), Expect = 3e-024
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VG+AFV QYY I + P + RFYQ+IS++GR +DG M +T I+ ++ L Y +
Sbjct: 16 VGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTYGDC 75
Query: 1499 R-AEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYV- 1326
AEI S D QES NGG + V G T + RKFTQ+FFLAPQ+KG+FVLND+ R+V
Sbjct: 76 NSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDILRFVN 135
Query: 1325 ENASHN-----EGSIAPAVDVEAP 1269
++A N +G + ++ P
Sbjct: 136 DDAKDNVPETIDGEVVSGINSTTP 159
Score = 106 bits (263), Expect = 7e-023
Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 6/140 (4%)
Frame = -3
Query: 950 RKQEQQVNNVPPTASAIEAAASNVDAVENGIHEDE-ADGYSIYIKGLPMSATPAMLDDEF 774
+ Q QQ ++ P + + +VDA ENG +++ A+G SIY++ LP +A ML+ EF
Sbjct: 280 KDQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEF 339
Query: 773 KKFGTIKPNGIQVRSNR--GFCFGFVEFETPEAVQKAIEASPVTIGGRAAVVEEKRSTNS 600
K+FG I GIQV + R G+ +GFVEFE +A +AIEASPV IGG A VEEK ST S
Sbjct: 340 KQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEASPVKIGGLRAFVEEKLST-S 398
Query: 599 KGGRGRFPAGRGSGYRNEGV 540
+G RG G G+ RN GV
Sbjct: 399 RGKRGNGNVGYGN--RNVGV 416
>TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035007 FORWARD
Length = 390
Score = 108 bits (269), Expect = 1e-023
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Frame = -3
Query: 1667 FVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEFRAEI 1488
FV QYY +L P R Y D S + RP+ G+M T+++ IN I+S ++ + E+
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSCDFENTKFEV 76
Query: 1487 KSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYV--ENAS 1314
SVD+Q SL G+ ++VIG +TGKDN RKF+Q F+LA Q+ VLNDM RYV E++S
Sbjct: 77 LSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVVLNDMLRYVDQEDSS 135
Query: 1313 HNEGSIAPAVDVEAPVDP-EQVAKSDPVLENHTPVEVAV 1200
E P ++ P D ++ K++ +N VE +V
Sbjct: 136 TTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSV 174
Score = 64 bits (155), Expect = 2e-010
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Frame = -3
Query: 1040 KKSYASIVLAMKQNAVPF--SSPVPAPRKAQPRKQEQQVNNVPPTASAIEAAASNVDAV- 870
K+S+A IV +M +NA PF SPV AP Q+ + P A+A + A ++
Sbjct: 215 KRSFADIVGSMAKNAAPFQVKSPVQAP------VQKPKYVGQPRAAAAPQKPAYVSKSIK 268
Query: 869 ENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNRGFCF 711
+N E G SI++ LP++A P L + FK FG IK NGIQVRS+R F
Sbjct: 269 KNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRVLIF 321
>TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035301 FORWARD
Length = 428
Score = 108 bits (269), Expect = 1e-023
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Frame = -3
Query: 1667 FVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEFRAEI 1488
FV QYY +L P R Y D S + RP+ G+M T+++ IN I+S ++ + E+
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSCDFENTKFEV 76
Query: 1487 KSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYV--ENAS 1314
SVD+Q SL G+ ++VIG +TGKDN RKF+Q F+LA Q+ VLNDM RYV E++S
Sbjct: 77 LSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVVLNDMLRYVDQEDSS 135
Query: 1313 HNEGSIAPAVDVEAPVDP-EQVAKSDPVLENHTPVEVAV 1200
E P ++ P D ++ K++ +N VE +V
Sbjct: 136 TTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSV 174
Score = 88 bits (217), Expect = 1e-017
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 20/175 (11%)
Frame = -3
Query: 1040 KKSYASIVLAMKQNAVPF--SSPVPAPRKAQPRKQEQQVNNVPPTASAIEAAASNVDAV- 870
K+S+A IV +M +NA PF SPV AP Q+ + P A+A + A ++
Sbjct: 215 KRSFADIVGSMAKNAAPFQVKSPVQAP------VQKPKYVGQPRAAAAPQKPAYVSKSIK 268
Query: 869 ENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNRG----FCFGFV 702
+N E G SI++ LP++A P L + FK FG IK NGIQVRS+RG CFGF+
Sbjct: 269 KNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFI 328
Query: 701 EFETPEAVQKAIEA---SPVTIGGRAAVVEEKRSTNSKGGRGRFPAGRGSGYRNE 546
FET +VQ ++A +P + R V+EK G P+G+ G N+
Sbjct: 329 SFETVASVQSVLQAAKNTPFMLADRKLRVKEKEVDYD----GSKPSGKTKGGSNK 379
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 94 bits (231), Expect = 3e-019
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Frame = -3
Query: 1679 VGNAFVTQYYQILHHSPSLVHRFYQDISKLGRPEEDGSMSLTTTMDDINSKIISLNYHEF 1500
VG+ F QYY L ++P +++ Y+D S + RP DG+M + T D+ K S +
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDL--KWRSPGSFD- 337
Query: 1499 RAEIKSVDAQESLNGGVDVLVIGLLTGKDNVVRKFTQSFFLAPQDKGYFVLNDMFRYVEN 1320
+I SV +Q+SL G+ V+V G LT + R FTQ FFL PQ+KGY V DMFR+V+
Sbjct: 338 SVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRFVDI 397
Query: 1319 ASHNEGSIAPAVDVEAPVDPE 1257
N +I PA DV PE
Sbjct: 398 PEAN-AAIPPANDVIEEKVPE 417
Score = 81 bits (199), Expect = 2e-015
Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = -3
Query: 845 ADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNRGFCFGFVEFETPEAVQKAI 666
A+ +I +K LP++AT A++++ FK+FG I+ G++VR+ R F +GFVEF+ A Q+AI
Sbjct: 1073 ANNAAICVKNLPLNATIALVENAFKQFGEIRRGGVEVRNKRSFSYGFVEFKEENAAQRAI 1132
Query: 665 EASPVTIGGRAAVVEEKRSTNSKGGRGRFPAGRGSGYRNEGV 540
+ASPVTI R+ VE+KR + G G YR+EG+
Sbjct: 1133 KASPVTIDLRSVYVEKKRPDYIRYW-DTPSTGPGIIYRSEGM 1173
>TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691220 REVERSE
Length = 392
Score = 86 bits (211), Expect = 7e-017
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Frame = -3
Query: 869 ENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNR---GFCFGFVE 699
E+G ++ + S+Y++ LP + + +++EFK FGTIKP+G+ +R+ + G C+ FVE
Sbjct: 246 EDGSGFEDFEFKSVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVE 305
Query: 698 FETPEAVQKAIEASPVTIGGRAAVVEEKRSTNSKGGRG-RFPAGRGSG 558
FE +V+ AI+ASP+ +GGR +EE+R N G RG R GRG G
Sbjct: 306 FEDMTSVENAIKASPIYLGGRQVYIEERR-PNPAGVRGARRGGGRGRG 352
>TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691653 REVERSE
Length = 451
Score = 86 bits (211), Expect = 7e-017
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Frame = -3
Query: 869 ENGIHEDEADGYSIYIKGLPMSATPAMLDDEFKKFGTIKPNGIQVRSNR---GFCFGFVE 699
E+G ++ + S+Y++ LP + + +++EFK FGTIKP+G+ +R+ + G C+ FVE
Sbjct: 305 EDGSGFEDFEFKSVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVE 364
Query: 698 FETPEAVQKAIEASPVTIGGRAAVVEEKRSTNSKGGRG-RFPAGRGSG 558
FE +V+ AI+ASP+ +GGR +EE+R N G RG R GRG G
Sbjct: 365 FEDMTSVENAIKASPIYLGGRQVYIEERR-PNPAGVRGARRGGGRGRG 411
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,205,439,890
Number of Sequences: 33410
Number of Extensions: 16205439890
Number of Successful Extensions: 707321995
Number of sequences better than 0.0: 0
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