Chrysanthenum transcriptome database

SwissProt blast output of UN77541


BLASTX 7.6.2

Query= UN77541 /QuerySize=652
        (651 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8CIK8|RFWD3_MOUSE E3 ubiquitin-protein ligase RFWD3 OS=Mus m...     58   5e-008
sp|Q6PCD5|RFWD3_HUMAN E3 ubiquitin-protein ligase RFWD3 OS=Homo ...     57   1e-007

>sp|Q8CIK8|RFWD3_MOUSE E3 ubiquitin-protein ligase RFWD3 OS=Mus musculus
        GN=Rfwd3 PE=2 SV=1

          Length = 774

 Score =  58 bits (138), Expect = 5e-008
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = -2

Query: 290 CPICLEPWTLDKIHQMCCLPCGHMFGISCLKEWMDDLSSDKCPQCFKVFSLESVWLLYAT 111
           C ICLE WT    H++  L CGH+FG  C+ +W+    + KCPQC K      + ++YA 
Sbjct: 288 CTICLEQWTNAGDHRISALRCGHLFGFRCISKWLKG-QTRKCPQCNKKAKHSDIVVIYAR 346

Query: 110 RL 105
            L
Sbjct: 347 SL 348

>sp|Q6PCD5|RFWD3_HUMAN E3 ubiquitin-protein ligase RFWD3 OS=Homo sapiens
        GN=RFWD3 PE=1 SV=3

          Length = 774

 Score =  57 bits (135), Expect = 1e-007
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = -2

Query: 323 STDCKRHDFNLCPICLEPWTLDKIHQMCCLPCGHMFGISCLKEWMDDLSSDKCPQCFKVF 144
           S      + + C ICLE WT    H++  L CGH+FG  C+  W+      KCPQC K  
Sbjct: 276 SASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISTWLKG-QVRKCPQCNKKA 334

Query: 143 SLESVWLLYATRL 105
               + +LYA  L
Sbjct: 335 RHSDIVVLYARTL 347

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,245,761,934
Number of Sequences: 537505
Number of Extensions: 129245761934
Number of Successful Extensions: 776251989
Number of sequences better than 0.0: 0