Chrysanthenum transcriptome database

GenBank blast output of UN74329


BLASTX 7.6.2

Query= UN74329 /QuerySize=791
        (790 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Copr...     97   3e-018
gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [...     91   3e-016
gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]                 86   7e-015
gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]          83   5e-014
gi|358346811|ref|XP_003637458.1| Transcription elongation factor...     79   7e-013
gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mam...     73   5e-011
gi|356559280|ref|XP_003547928.1| PREDICTED: DNA-binding protein ...     64   2e-008

>gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Coprinopsis cinerea
        okayama7#130]

          Length = 173

 Score =  97 bits (240), Expect = 3e-018
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
 Frame = -2

Query: 345 CYNCGGVGHIARDCSSNVVVRSGGCYTCGGLGHIARDXXXXXXXXXXXXXFNCGEEGHMA 166
           C+NCGG GH A +C       +  CY CGG GH++RD             + CGEEGH++
Sbjct:   7 CFNCGGFGHQAANCPK---AGTPTCYNCGGEGHVSRD---CTQAAKPKSCYRCGEEGHLS 60

Query: 165 RDCTSASVDGGRGSRGGACFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYNCG 4
           RDCTS +   G  SRGG C+ CG+ GH+A+ C                 CY CG
Sbjct:  61 RDCTSDNAAAGGVSRGGECYRCGKTGHLARSCPD---SGYGSFGGSQKTCYTCG 111

>gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [Saccoglossus
        kowalevskii]

          Length = 679

 Score =  91 bits (223), Expect = 3e-016
 Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -2

Query: 345 CYNCGGVGHIARDC--SSNVVVRSGGCYTCGGLGHIARD-XXXXXXXXXXXXXFNCGEEG 175
           C+ CG  GH++R+C        R  GC+ CG  GH++RD              F CGE G
Sbjct: 150 CFKCGEDGHMSRECPQGGGGGGRGRGCFKCGEEGHMSRDCTSGGLGKSSGGGCFKCGESG 209

Query: 174 HMARDCTSASVDGGRGSRGGACFTCGEVGHMAKDCSSD 61
           H +R+C +A   GG G  GG CF CGE GH AKDC+++
Sbjct: 210 HFSRECPNAESGGGGGGGGGNCFRCGESGHFAKDCTNE 247

>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]

          Length = 1748

 Score =  86 bits (211), Expect = 7e-015
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = -2

Query:  345 CYNCGGVGHIARDCS---SNVVVRSGGCYTCGGLGHIARDXXXXXXXXXXXXXFNCGEEG 175
            C+ CG VGH+A+DC+        +SG C+ C   GH+++D             F CGEEG
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKD--CPNQQQKKSGCFKCGEEG 1508

Query:  174 HMARDCTSASVDGGRGSRGGACFTCGEVGHMAKDC 70
            H ++DC +      +  RGGACF CGE GH++KDC
Sbjct: 1509 HFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDC 1543

>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]

          Length = 707

 Score =  83 bits (204), Expect = 5e-014
 Identities = 49/127 (38%), Positives = 62/127 (48%), Gaps = 24/127 (18%)
 Frame = -2

Query: 345 CYNCGGVGHIARDCSSNVVVRSGG-----CYTCGGLGHIARD------XXXXXXXXXXXX 199
           C  CG  GH A +C+S      GG     C+ CG  GH++R+                  
Sbjct:  56 CRKCGEEGHRAFECTSG----GGGGGNRACFKCGEEGHMSRECPQGGGQSFGGGGGGNRG 111

Query: 198 XFNCGEEGHMARDCTSASVDGGRGSRGG-ACFTCGEVGHMAKDCSSDXXXXXXXXXXXXX 22
            F CGEEGHM+RDC + SV+GG G+ GG  CF CGE GHM++DC S              
Sbjct: 112 CFKCGEEGHMSRDCPN-SVNGGGGASGGKGCFKCGEEGHMSRDCPS-------SGNGGGK 163

Query:  21 XCYNCGE 1
            C+ CGE
Sbjct: 164 GCFKCGE 170

>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago
        truncatula]

          Length = 2159

 Score =  79 bits (194), Expect = 7e-013
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = -2

Query:  279 GGCYTCGGLGHIARD-----XXXXXXXXXXXXXFNCGEEGHMARDCTSASVDGGRGSRGG 115
            G CY CG  GH+AR+                  + CGE GHMARDCT     GG    GG
Sbjct: 1458 GSCYKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARDCTQEGGGGGGRGGGG 1517

Query:  114 ACFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYNCGE 1
            +C+ CGE GHMA++C+ +              CY CGE
Sbjct: 1518 SCYKCGESGHMARECTQE---GGGGGRGGGGTCYKCGE 1552


 Score =  78 bits (191), Expect = 2e-012
 Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = -2

Query:  279 GGCYTCGGLGHIAR----DXXXXXXXXXXXXXFNCGEEGHMARDCTSASVDGGRGSRGGA 112
            G CY CG  GH+AR    +             + CGE GHMAR+CT     GG    GG+
Sbjct: 1400 GSCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGS 1459

Query:  111 CFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYNCGE 1
            C+ CGE GHMA++C+ +              CY CGE
Sbjct: 1460 CYKCGESGHMARECTQE-GGGGGRGGGGGGTCYKCGE 1495


 Score =  76 bits (186), Expect = 6e-012
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
 Frame = -2

Query:  279 GGCYTCGGLGHIAR----DXXXXXXXXXXXXXFNCGEEGHMARDCTSASVDGGRGSRGGA 112
            G C+ CG  GH+AR    +             + CGE GHMAR+CT     GG    GG+
Sbjct: 1371 GACHKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGS 1430

Query:  111 CFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYNCGE 1
            C+ CGE GHMA++C+ +              CY CGE
Sbjct: 1431 CYKCGESGHMARECTQE--GGGGGGRGGGGSCYKCGE 1465


 Score =  65 bits (158), Expect = 1e-008
 Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -2

Query:  189 CGEEGHMARDCTSASVDGGRGSRGGACFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYN 10
            CGE GHMAR+CT     GG    GG+C+ CGE GHMA++C+ +              CY 
Sbjct: 1376 CGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQE--GGGGGGRGGGGSCYK 1433

Query:    9 CGE 1
            CGE
Sbjct: 1434 CGE 1436

>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]

          Length = 851

 Score =  73 bits (178), Expect = 5e-011
 Identities = 41/114 (35%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
 Frame = -2

Query: 309 DCSSNVVVRSGG-----CYTCGGLGHIARDXXXXXXXX------XXXXXFNCGEEGHMAR 163
           D SS     SGG     C+ CG  GH++R+                   F CGEEGHM+R
Sbjct: 181 DSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGGFGGGKSRGCFKCGEEGHMSR 240

Query: 162 DCTSASVDGGRGSRGGACFTCGEVGHMAKDCSSDXXXXXXXXXXXXXXCYNCGE 1
           DC S    G  G +  +CF CGE GHM++DC S               C+ CGE
Sbjct: 241 DCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPS-GGSQGGFGGGRPKGCFKCGE 293

>gi|356559280|ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like
        [Glycine max]

          Length = 250

 Score =  64 bits (155), Expect = 2e-008
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -2

Query: 195 FNCGEEGHMARDCTSASVDGGRGSRGGACFTCGEVGHMAKDCSSD 61
           F CG  GHMARDC +   + G GS GG CF CGEVGH+A+DC  +
Sbjct: 168 FRCGGFGHMARDCATGKGNIGGGSSGGGCFRCGEVGHLARDCGME 212

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,539,764,412,833
Number of Sequences: 20571509
Number of Extensions: 4539764412833
Number of Successful Extensions: 1214800671
Number of sequences better than 0.0: 0