Arabidopsis blast output of UN70950
BLASTX 7.6.2
Query= UN70950 /QuerySize=2541
(2540 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G29200.1 | Symbols: APUM1 | APUM1 (Arabidopsis... 581 8e-166
TAIR9_protein||AT2G29190.1 | Symbols: APUM2 | APUM2 (Arabidopsis... 580 1e-165
TAIR9_protein||AT2G29140.1 | Symbols: APUM3 | APUM3 (Arabidopsis... 575 7e-164
TAIR9_protein||AT3G10360.1 | Symbols: APUM4 | APUM4 (Arabidopsis... 541 1e-153
TAIR9_protein||AT3G20250.1 | Symbols: APUM5 | APUM5 (Arabidopsis... 440 3e-123
TAIR9_protein||AT4G25880.1 | Symbols: APUM6 | APUM6 (Arabidopsis... 413 3e-115
TAIR9_protein||AT4G25880.3 | Symbols: APUM6 | APUM6 (Arabidopsis... 397 2e-110
TAIR9_protein||AT4G25880.2 | Symbols: APUM6 | APUM6 (Arabidopsis... 396 4e-110
TAIR9_protein||AT1G22240.1 | Symbols: APUM8 | APUM8 (Arabidopsis... 180 5e-045
TAIR9_protein||AT1G78160.1 | Symbols: APUM7 | APUM7 (Arabidopsis... 113 6e-025
>TAIR9_protein||AT2G29200.1 | Symbols: APUM1 | APUM1 (Arabidopsis Pumilio 1);
RNA binding / binding | chr2:12549483-12553185 REVERSE
Length = 969
Score = 581 bits (1497), Expect = 8e-166
Identities = 287/350 (82%), Positives = 312/350 (89%)
Frame = -2
Query: 1585 ESFPSSLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEI 1406
E F SS+L+EFKSNKT+ FELSEI GHVVEFS+DQYGSRFIQQKLETAT +EK+MV+ EI
Sbjct: 608 EGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEI 667
Query: 1405 MPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVV 1226
MPQA LMTDVFGNYVIQKFFEHG Q RELA++L HVL LSLQMYGCRVIQKAIEVV
Sbjct: 668 MPQALVLMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVV 727
Query: 1225 DLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPY 1046
DLDQ+ KMV ELDGH+MRCVRDQNGNHV+QKCIECVPE+ I FIIS F+ VVTLSTHPY
Sbjct: 728 DLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPY 787
Query: 1045 GCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQ 866
GCRVIQRVLEHCHDP TQS VM+EIL ++ MLAQDQYGNYVVQHVLEHGKP ERT II +
Sbjct: 788 GCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKE 847
Query: 865 LTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVV 686
L G+IVQMSQQKFASNVVEKCLTFG PEER++LV EMLGTTDENEPLQ MMKDQFANYVV
Sbjct: 848 LAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVV 907
Query: 685 QKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEKRI 536
QKVLETCDD Q E IL RIKVHL ALKKYTYGKH+VAR+EKLVAAGE+R+
Sbjct: 908 QKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRM 957
>TAIR9_protein||AT2G29190.1 | Symbols: APUM2 | APUM2 (Arabidopsis Pumilio 2);
RNA binding / binding | chr2:12544260-12548071 REVERSE
Length = 973
Score = 580 bits (1495), Expect = 1e-165
Identities = 288/350 (82%), Positives = 312/350 (89%)
Frame = -2
Query: 1585 ESFPSSLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEI 1406
E F SS+L+EFKSNKT+ FEL+EI GHVVEFS+DQYGSRFIQQKLETAT +EK+MV+ EI
Sbjct: 612 EGFGSSMLEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEI 671
Query: 1405 MPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVV 1226
MP A +LMTDVFGNYVIQKFFEHG Q RELAD+L +VL LSLQMYGCRVIQKAIEVV
Sbjct: 672 MPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVV 731
Query: 1225 DLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPY 1046
DLDQ+ KMV ELDGH+MRCVRDQNGNHV+QKCIECVPE+ I FIIS F+ VVTLSTHPY
Sbjct: 732 DLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPY 791
Query: 1045 GCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQ 866
GCRVIQRVLEHCHDP TQS VMDEI+ +I MLAQDQYGNYV+QHVLEHGKP ERT II +
Sbjct: 792 GCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKE 851
Query: 865 LTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVV 686
L G+IVQMSQQKFASNVVEKCLTFG PEER+ LV EMLGTTDENEPLQ MMKDQFANYVV
Sbjct: 852 LAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVV 911
Query: 685 QKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEKRI 536
QKVLETCDD Q E IL RIKVHLNALKKYTYGKHIVARVEKLVAAGE+R+
Sbjct: 912 QKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 961
>TAIR9_protein||AT2G29140.1 | Symbols: APUM3 | APUM3 (Arabidopsis Pumilio 3);
RNA binding / binding | chr2:12531392-12535060 FORWARD
Length = 965
Score = 575 bits (1480), Expect = 7e-164
Identities = 284/350 (81%), Positives = 312/350 (89%)
Frame = -2
Query: 1585 ESFPSSLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEI 1406
E F SS+L+EFKSNKT+ FELSEI GHVVEFS+DQYGSRFIQQKLETAT +EK+MV+ EI
Sbjct: 604 EGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEI 663
Query: 1405 MPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVV 1226
MP+A +LMTDVFGNYVIQKFFEHG Q REL ++L +VL LSLQMYGCRVIQKAIEVV
Sbjct: 664 MPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVV 723
Query: 1225 DLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPY 1046
DLDQ+ +MV ELDGH+MRCVRDQNGNHV+QKCIECVPE+ I FIIS F+ VVTLSTHPY
Sbjct: 724 DLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPY 783
Query: 1045 GCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQ 866
GCRVIQRVLEHCH+P TQS VM+EIL ++ ML QDQYGNYVVQHVLEHGKP ERT II +
Sbjct: 784 GCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKE 843
Query: 865 LTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVV 686
L G+IVQMSQQKFASNVVEKCLTFG PEER++LV EMLGTTDENEPLQ MMKDQFANYVV
Sbjct: 844 LAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVV 903
Query: 685 QKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEKRI 536
QKVLETCDD Q E IL RIKVHLNALKKYTYGKHIVARVEKLVAAGE+R+
Sbjct: 904 QKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRM 953
>TAIR9_protein||AT3G10360.1 | Symbols: APUM4 | APUM4 (Arabidopsis Pumilio 4);
RNA binding / binding | chr3:3211276-3215144 REVERSE
Length = 1004
Score = 541 bits (1392), Expect = 1e-153
Identities = 263/352 (74%), Positives = 303/352 (86%)
Frame = -2
Query: 1588 GESFPSSLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNE 1409
G + +SLL+ FK+NKT+ ELSEIVGHV+EFS DQYGSRFIQQKLETAT EEK+ +F E
Sbjct: 641 GSTAEASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPE 700
Query: 1408 IMPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEV 1229
I+P +LMTDVFGNYVIQKFFEHG Q +ELA+Q+ GHVL LSLQMYGCRVIQKA+EV
Sbjct: 701 ILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEV 760
Query: 1228 VDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHP 1049
V+L+QQ +MV ELDG +M+CV DQNGNHVIQKCIE +P+D I FIIS FY +V+ LSTHP
Sbjct: 761 VELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHP 820
Query: 1048 YGCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIID 869
YGCRVIQRVLEH D +TQ I+M+EI+ S+C LAQDQYGNYV+QH+++HGKPHER+ II+
Sbjct: 821 YGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIIN 880
Query: 868 QLTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYV 689
+L GQIV+MSQQKFASNVVEKCLTFG PEERQVLV EMLG TDENEPLQ MMKD F NYV
Sbjct: 881 KLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYV 940
Query: 688 VQKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEKRIG 533
VQKVLETCDD L IL+RIKVHLNALK+YTYGKHIVARVEKL+ GE+RIG
Sbjct: 941 VQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIG 992
>TAIR9_protein||AT3G20250.1 | Symbols: APUM5 | APUM5 (Arabidopsis Pumilio 5);
RNA binding / binding | chr3:7059098-7062660 REVERSE
Length = 962
Score = 440 bits (1130), Expect = 3e-123
Identities = 220/359 (61%), Positives = 269/359 (74%), Gaps = 6/359 (1%)
Frame = -2
Query: 1618 FPSGIRNLVGGESF------PSSLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQ 1457
+P G + GG S S LDE KS + ELS+I G VVEFS DQ+GSRFIQQ
Sbjct: 589 YPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQ 648
Query: 1456 KLETATVEEKDMVFNEIMPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTL 1277
KLE + EEK VF+E++PQA LMTDVFGNYVIQKF EHG AQ EL QL G +++L
Sbjct: 649 KLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSL 708
Query: 1276 SLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHF 1097
SLQMYGCRVIQKA+EV+D+DQ+T+++ ELDG++++CVRDQNGNHVIQKCIE +P I F
Sbjct: 709 SLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGF 768
Query: 1096 IISVFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQ 917
+I+ F QV TLSTHPYGCRVIQR+LEHC D + ++DEIL+S LA DQYGNYV Q
Sbjct: 769 VIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQ 828
Query: 916 HVLEHGKPHERTCIIDQLTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDE 737
HVLE GKP ER II++LTG +VQMSQ K+ASNVVEKCL ER+ L+ E++G ++E
Sbjct: 829 HVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEE 888
Query: 736 NEPLQVMMKDQFANYVVQKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKL 560
+ L MMKDQFANYVVQKVLE D Q E ++ R+K+HL +L+KYTYGKHIVAR E+L
Sbjct: 889 DNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQL 947
>TAIR9_protein||AT4G25880.1 | Symbols: APUM6 | APUM6 (Arabidopsis Pumilio 6);
RNA binding / binding | chr4:13155518-13159078 FORWARD
Length = 862
Score = 413 bits (1061), Expect = 3e-115
Identities = 199/336 (59%), Positives = 255/336 (75%)
Frame = -2
Query: 1570 SLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAF 1391
+ L+E KS K + F+LS+I GH+VEFSADQ+GSRFIQQKLE EEK VF EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 1390 SLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQ 1211
LMTDVFGNYVIQKFFE+GN+ Q +ELADQL G ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 1210 TKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVI 1031
++ ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 1030 QRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTGQI 851
QR+LE C + +EIL+S+C+L++DQYGNYV QHVLE G ER I +L+G I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 850 VQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLE 671
VQ+S KFASNV+EKCL +G ER +++ E+ G + L +MMKDQ+ NYVVQK+ E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 814
Query: 670 TCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEK 563
TC Q T+ +R+++H +ALKKYTYGKHIV+R+E+
Sbjct: 815 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQ 850
>TAIR9_protein||AT4G25880.3 | Symbols: APUM6 | APUM6 (Arabidopsis Pumilio 6);
RNA binding / binding | chr4:13155518-13159070 FORWARD
Length = 859
Score = 397 bits (1019), Expect = 2e-110
Identities = 196/343 (57%), Positives = 251/343 (73%), Gaps = 6/343 (1%)
Frame = -2
Query: 1570 SLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAF 1391
+ L+E KS K + F+LS+I GH+VEF SRFIQQKLE EEK VF EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEF------SRFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 1390 SLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQ 1211
LMTDVFGNYVIQKFFE+GN+ Q +ELADQL G ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 1210 TKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVI 1031
++ ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 1030 QRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTGQI 851
QR+LE C + +EIL+S+C+L++DQYGNYV QHVLE G ER I +L+G I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 850 VQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLE 671
VQ+S KFASNV+EKCL +G ER +++ E+ G + L +MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 670 TCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEKLVAAGEK 542
TC Q T+ +R+++H +ALKKYTYGKHIV+R+E+ G K
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIEGMK 851
Score = 109 bits (271), Expect = 1e-023
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 13/257 (5%)
Frame = -2
Query: 1546 NKTKCFELS-EIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAFSLMTDVF 1370
N T+ EL+ +++G +V S YG R IQ+ L+ +++ + E+ Q + D
Sbjct: 588 NSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQN 647
Query: 1369 GNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAEL 1190
GN+VIQK E+ A ++ + G V +LS+ YGCRVIQ+ +E D Q + + E
Sbjct: 648 GNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITE- 706
Query: 1189 DGHIMRCV----RDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVIQRV 1022
I+ V +DQ GN+V Q +E + I +V LS H + VI++
Sbjct: 707 --EILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKC 764
Query: 1021 LEHCHDPKTQSIVM-----DEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTG 857
LE+ + I+ DE S+ M+ +DQYGNYVVQ + E +R + ++
Sbjct: 765 LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRM 824
Query: 856 QIVQMSQQKFASNVVEK 806
+ + + ++V +
Sbjct: 825 HASALKKYTYGKHIVSR 841
Score = 86 bits (211), Expect = 1e-016
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 8/262 (3%)
Frame = -2
Query: 1519 EIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAFSLMTDVFGNYVIQKFFE 1340
EI+ H + D +G+ IQ+ E ++ + +++M Q L ++G VIQK +
Sbjct: 562 EILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALD 621
Query: 1339 HGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRD 1160
Q LA +L+G V+ G VIQK IE + D+ M+ G +
Sbjct: 622 VIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMH 681
Query: 1159 QNGNHVIQKCIE-CVPEDAIHFIISVFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQSIV 983
G VIQ+ +E C + FI + V LS YG V Q VLE + + I
Sbjct: 682 PYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIG 741
Query: 982 MDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTG------QIVQMSQQKFAS 821
++ I L+ ++ + V++ LE+G ER II ++ G ++ M + ++ +
Sbjct: 742 R-KLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGN 800
Query: 820 NVVEKCLTFGTPEERQVLVTEM 755
VV+K T ++R L + +
Sbjct: 801 YVVQKIFETCTADQRLTLFSRV 822
>TAIR9_protein||AT4G25880.2 | Symbols: APUM6 | APUM6 (Arabidopsis Pumilio 6);
RNA binding / binding | chr4:13155518-13159078 FORWARD
Length = 856
Score = 396 bits (1017), Expect = 4e-110
Identities = 194/336 (57%), Positives = 249/336 (74%), Gaps = 6/336 (1%)
Frame = -2
Query: 1570 SLLDEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAF 1391
+ L+E KS K + F+LS+I GH+VEF SRFIQQKLE EEK VF EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEF------SRFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 1390 SLMTDVFGNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQ 1211
LMTDVFGNYVIQKFFE+GN+ Q +ELADQL G ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 1210 TKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVI 1031
++ ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 1030 QRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTGQI 851
QR+LE C + +EIL+S+C+L++DQYGNYV QHVLE G ER I +L+G I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 850 VQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLE 671
VQ+S KFASNV+EKCL +G ER +++ E+ G + L +MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 670 TCDDHQLETILNRIKVHLNALKKYTYGKHIVARVEK 563
TC Q T+ +R+++H +ALKKYTYGKHIV+R+E+
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQ 844
Score = 109 bits (272), Expect = 9e-024
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 14/270 (5%)
Frame = -2
Query: 1546 NKTKCFELS-EIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAFSLMTDVF 1370
N T+ EL+ +++G +V S YG R IQ+ L+ +++ + E+ Q + D
Sbjct: 588 NSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQN 647
Query: 1369 GNYVIQKFFEHGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAEL 1190
GN+VIQK E+ A ++ + G V +LS+ YGCRVIQ+ +E D Q + + E
Sbjct: 648 GNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITE- 706
Query: 1189 DGHIMRCV----RDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVIQRV 1022
I+ V +DQ GN+V Q +E + I +V LS H + VI++
Sbjct: 707 --EILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKC 764
Query: 1021 LEHCHDPKTQSIVM-----DEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTG 857
LE+ + I+ DE S+ M+ +DQYGNYVVQ + E +R + ++
Sbjct: 765 LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRM 824
Query: 856 QIVQMSQQKFASNVVEKCLTFGTPEERQVL 767
+ + + ++V + L + EE Q L
Sbjct: 825 HASALKKYTYGKHIVSR-LEQPSIEENQEL 853
Score = 86 bits (211), Expect = 1e-016
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 8/262 (3%)
Frame = -2
Query: 1519 EIVGHVVEFSADQYGSRFIQQKLETATVEEKDMVFNEIMPQAFSLMTDVFGNYVIQKFFE 1340
EI+ H + D +G+ IQ+ E ++ + +++M Q L ++G VIQK +
Sbjct: 562 EILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALD 621
Query: 1339 HGNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHIMRCVRD 1160
Q LA +L+G V+ G VIQK IE + D+ M+ G +
Sbjct: 622 VIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMH 681
Query: 1159 QNGNHVIQKCIE-CVPEDAIHFIISVFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQSIV 983
G VIQ+ +E C + FI + V LS YG V Q VLE + + I
Sbjct: 682 PYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIG 741
Query: 982 MDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTG------QIVQMSQQKFAS 821
++ I L+ ++ + V++ LE+G ER II ++ G ++ M + ++ +
Sbjct: 742 R-KLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGN 800
Query: 820 NVVEKCLTFGTPEERQVLVTEM 755
VV+K T ++R L + +
Sbjct: 801 YVVQKIFETCTADQRLTLFSRV 822
>TAIR9_protein||AT1G22240.1 | Symbols: APUM8 | APUM8 (Arabidopsis Pumilio 8);
RNA binding / binding | chr1:7853084-7854963 FORWARD
Length = 516
Score = 180 bits (455), Expect = 5e-045
Identities = 112/348 (32%), Positives = 188/348 (54%), Gaps = 14/348 (4%)
Frame = -2
Query: 1594 VGGESFPSSLLDE--FKSNKTKCF-ELSEIVGHVVEFSADQYGSRFIQQKLETATVEEKD 1424
V G+S +L D SN + ++SE G+V + DQ+G RF+Q E + +
Sbjct: 170 VHGKSGVGALFDHQGISSNPNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDAL 229
Query: 1423 MVFNEIMPQAFSLMTDVFGNYVIQKFFEHGNAAQIRELADQLN---GHVLTLSLQMYGCR 1253
++F+E++P LM D FGNY++QK + N Q ++ + G ++ +SL YG R
Sbjct: 230 VIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTR 289
Query: 1252 VIQKAIEVVDLDQQTKMV-AELDGHIMRCVRDQNGNHVIQKCIECVPEDAIHFIISVFYD 1076
V+Q+ +E + +Q +V + L + +RD NGNHVIQ+C++C+ + FI
Sbjct: 290 VVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATK 349
Query: 1075 QVVTLSTHPYGCRVIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGK 896
+ ++TH +GC V+Q+ + + + + +V EI ++ LAQD YGNY VQ VLE
Sbjct: 350 FCIDIATHRHGCCVLQKCIAYSSGLQREKLV-TEISRNSLFLAQDPYGNYAVQFVLELRD 408
Query: 895 PHERTCIIDQLTGQIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVM 716
++ QL G V++S QKF+S++VE+CLT PE R +V E++ ++
Sbjct: 409 FSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTH-CPESRPQIVRELISVPH----FDIL 463
Query: 715 MKDQFANYVVQKVLETCDDHQLETILNRIKVHLNALKKYTYGKHIVAR 572
++D +AN+V+Q L T++ I+ H + L+ Y K I +R
Sbjct: 464 IQDPYANFVIQAALAVTKGSLHATLVEVIRPH-SILRNNPYCKRIFSR 510
Score = 99 bits (246), Expect = 9e-021
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 13/275 (4%)
Frame = -2
Query: 1375 VFGNYVIQKFFEH----GNAAQIRELADQLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQT 1208
V G + F+H N + + G+V ++ +GCR +Q E
Sbjct: 170 VHGKSGVGALFDHQGISSNPNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDAL 229
Query: 1207 KMVAELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIHFIISVFYD--QVVTLSTHPYGCR 1037
+ +E+ H++ + D GN+++QK ++ C E I+ V + Q++ +S + YG R
Sbjct: 230 VIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTR 289
Query: 1036 VIQRVLEHCHDPKTQSIVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTG 857
V+QR++E K S+V + L +D GN+V+Q L+ + I + T
Sbjct: 290 VVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATK 349
Query: 856 QIVQMSQQKFASNVVEKCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVVQKV 677
+ ++ + V++KC+ + + +R+ LVTE+ + + +D + NY VQ V
Sbjct: 350 FCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEI------SRNSLFLAQDPYGNYAVQFV 403
Query: 676 LETCDDHQLETILNRIKVHLNALKKYTYGKHIVAR 572
LE D + +L ++K H L + H+V R
Sbjct: 404 LELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVER 438
>TAIR9_protein||AT1G78160.1 | Symbols: APUM7 | APUM7 (Arabidopsis Pumilio 7);
RNA binding / binding | chr1:29407900-29410184 FORWARD
Length = 651
Score = 113 bits (282), Expect = 6e-025
Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
Frame = -2
Query: 1168 VRDQNGNHVIQKCIECVPEDAIHFIISVFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQS 989
++D NGNHVIQ+C++C+ + FI ++TH +GC V+Q+ + + + +
Sbjct: 454 IKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREK 513
Query: 988 IVMDEILKSICMLAQDQYGNYVVQHVLEHGKPHERTCIIDQLTGQIVQMSQQKFASNVVE 809
++ EI ++ +LAQD +GNY VQ V+E P ++ QL G VQ+S QKF+S++VE
Sbjct: 514 LIA-EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572
Query: 808 KCLTFGTPEERQVLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDHQLETILNRI 629
+CL PE R +V E++ ++ LQ D +AN+V+Q L +++ I
Sbjct: 573 RCL-MHCPESRPQIVRELVSVPHFDQLLQ----DPYANFVIQAALAATKGPLHASLVEVI 627
Query: 628 KVHLNALKKYTYGKHIVAR 572
+ H + L+ Y K I +R
Sbjct: 628 RPH-SILRNNPYCKRIFSR 645
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,425,982,521
Number of Sequences: 33410
Number of Extensions: 14425982521
Number of Successful Extensions: 630649916
Number of sequences better than 0.0: 0
|