Arabidopsis blast output of UN70864
BLASTX 7.6.2
Query= UN70864 /QuerySize=1613
(1612 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G21390.1 | Symbols: | coatomer protein comple... 934 4e-272
TAIR9_protein||AT1G62020.1 | Symbols: | coatomer protein comple... 927 3e-270
TAIR9_protein||AT1G79990.3 | Symbols: | protein binding / struc... 144 2e-034
TAIR9_protein||AT1G79990.1 | Symbols: | protein binding / struc... 144 2e-034
TAIR9_protein||AT1G79990.5 | Symbols: | protein binding / struc... 144 2e-034
TAIR9_protein||AT3G15980.1 | Symbols: | coatomer protein comple... 140 4e-033
TAIR9_protein||AT3G15980.2 | Symbols: | coatomer protein comple... 140 4e-033
TAIR9_protein||AT3G15980.3 | Symbols: | coatomer protein comple... 140 4e-033
TAIR9_protein||AT1G52360.1 | Symbols: | coatomer protein comple... 137 3e-032
TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family pro... 99 7e-021
TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding | ch... 97 2e-020
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 94 2e-019
TAIR9_protein||AT3G49660.1 | Symbols: | transducin family prote... 82 9e-016
TAIR9_protein||AT3G16650.1 | Symbols: | PP1/PP2A phosphatases p... 82 1e-015
TAIR9_protein||AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC R... 78 2e-014
TAIR9_protein||AT5G13480.1 | Symbols: FY | FY; protein binding |... 76 6e-014
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 69 1e-011
>TAIR9_protein||AT2G21390.1 | Symbols: | coatomer protein complex, subunit
alpha, putative | chr2:9152428-9156577 FORWARD
Length = 1219
Score = 934 bits (2412), Expect = 4e-272
Identities = 441/494 (89%), Positives = 473/494 (95%)
Frame = -2
Query: 1482 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 1303
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 1302 QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 1123
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 1122 NWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDILR 943
NWQSRTCISVLTGHNHYVMCA+FHPKEDLVVSASLDQTVRVWDIGALKKKSASPADD++R
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR 180
Query: 942 LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE 763
SQMN+D FGGVDA+VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVK+WRMN+TKAWE
Sbjct: 181 FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 762 VDTLRGHMNNVSCVLFHAKQDIIISNSEDKSIRVWDATKRTGLQTFRREHDRFWILGCHP 583
VDTLRGHMNNVS V+FHAKQDII+SNSEDKSIRVWDATKRTG+QTFRREHDRFWIL HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP 300
Query: 582 EMNLLAAGHDSGMIVFKLERERPAFSVSGDSLYYVKDRFLRFYEYSTQKETQIIPIRRPG 403
E+NLLAAGHD+GMIVFKLERERPAF++SGDSL+Y KDRFLR+YEYSTQK++Q+IPIRRPG
Sbjct: 301 EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG 360
Query: 402 SVGLNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSFSRGDTVQEAKRGVGASAVF 223
+ LNQ PRTLSYSPTENAVLICSD+DGGSYELYI+PKDS R D VQ+AKRG G SAVF
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 222 VARNRFAVLEKSTNQVLVKNLKNEIVKKSALPVATDAIFYAGTGNLLCRAEDRVFIFDLQ 43
+ARNRFAVLEKST+QVLVKNLKNE+VKKS+LP+ TDAIFYAGTGNLLCR+ED+V IFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 42 QRLVLGDLQTSFVR 1
QRLVLG+LQT FVR
Sbjct: 481 QRLVLGELQTPFVR 494
>TAIR9_protein||AT1G62020.1 | Symbols: | coatomer protein complex, subunit
alpha, putative | chr1:22919814-22923728 FORWARD
Length = 1217
Score = 927 bits (2395), Expect = 3e-270
Identities = 438/494 (88%), Positives = 471/494 (95%)
Frame = -2
Query: 1482 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 1303
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 1302 QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 1123
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHE PWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 1122 NWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDILR 943
NWQSRTC+SVLTGHNHYVMCA+FHPKEDLVVSASLDQTVRVWDIGAL+KK+ SPADDI+R
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR 180
Query: 942 LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE 763
L+QMN+D FGGVDA+VKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVK+WRMN+TKAWE
Sbjct: 181 LTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 762 VDTLRGHMNNVSCVLFHAKQDIIISNSEDKSIRVWDATKRTGLQTFRREHDRFWILGCHP 583
VDTLRGHMNNVS V+FHAKQDII+SNSEDKSIRVWDATKRTGLQTFRREHDRFWIL HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHP 300
Query: 582 EMNLLAAGHDSGMIVFKLERERPAFSVSGDSLYYVKDRFLRFYEYSTQKETQIIPIRRPG 403
EMNLLAAGHDSGMIVFKLERERPAF++SGDSL+Y KDRFLR+YEYSTQ+++Q+IPIRRPG
Sbjct: 301 EMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPG 360
Query: 402 SVGLNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSFSRGDTVQEAKRGVGASAVF 223
+ LNQ PRTLSYSPTENAVLICSD+DGGSYELYI+PKDS R D VQ+AKRG G SAVF
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 222 VARNRFAVLEKSTNQVLVKNLKNEIVKKSALPVATDAIFYAGTGNLLCRAEDRVFIFDLQ 43
+ARNRFAVLEKST+QVLVKNLKNE+VKKS LP+ TDAIFYAGTGNLLCR+ED+V IFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 42 QRLVLGDLQTSFVR 1
QRLVLG+LQT FVR
Sbjct: 481 QRLVLGELQTPFVR 494
>TAIR9_protein||AT1G79990.3 | Symbols: | protein binding / structural molecule
| chr1:30085910-30091949 FORWARD
Length = 921
Score = 144 bits (362), Expect = 2e-034
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T++ FD + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
C + GH+HYVM TF+PK+ + SASLD+T+++W++G+
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT1G79990.1 | Symbols: | protein binding / structural molecule
| chr1:30084522-30091949 FORWARD
Length = 1136
Score = 144 bits (362), Expect = 2e-034
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T++ FD + PVR F +
Sbjct: 225 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 284
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 285 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
C + GH+HYVM TF+PK+ + SASLD+T+++W++G+
Sbjct: 345 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 389
>TAIR9_protein||AT1G79990.5 | Symbols: | protein binding / structural molecule
| chr1:30085910-30091949 FORWARD
Length = 913
Score = 144 bits (362), Expect = 2e-034
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T++ FD + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
C + GH+HYVM TF+PK+ + SASLD+T+++W++G+
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta
2 (beta prime), putative | chr3:5411699-5418313 REVERSE
Length = 910
Score = 140 bits (351), Expect = 4e-033
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T+ F+ + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
+ C + GH+HYVM F+PK+ + SASLD+T+++W++G+
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta
2 (beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 919
Score = 140 bits (351), Expect = 4e-033
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T+ F+ + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
+ C + GH+HYVM F+PK+ + SASLD+T+++W++G+
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta
2 (beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 919
Score = 140 bits (351), Expect = 4e-033
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
KF +S RVK + H PWILASL+SG + +W+Y+ T+ F+ + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
+ C + GH+HYVM F+PK+ + SASLD+T+++W++G+
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta
2 (beta prime), putative | chr1:19499282-19505397 FORWARD
Length = 927
Score = 137 bits (343), Expect = 3e-032
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Frame = -2
Query: 1473 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQ 1294
K +S RVK + H PWILASL+SG + +W+Y+ + F+ + PVR F +
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 1293 PLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 1114
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 1113 SR-TCISVLTGHNHYVMCATFHPKE-DLVVSASLDQTVRVWDIGA 985
C + GH+HYVM TF+PK+ + SASLD+T+++W++G+
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
>TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin
p80 subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1181
Score = 99 bits (245), Expect = 7e-021
Identities = 49/166 (29%), Positives = 78/166 (46%)
Frame = -2
Query: 1488 PTMLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 1309
PT L ++ V ++F S +LA SGVI+LWD ++ F H V
Sbjct: 48 PTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVE 107
Query: 1308 FHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 1129
FH SG D +K+W+ + C+ T GH I T++F + W+VS D ++
Sbjct: 108 FHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVK 167
Query: 1128 IWNWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+W+ + + H + FHP E L+ + S D+TV+ WD+
Sbjct: 168 VWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 70 bits (169), Expect = 4e-012
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = -2
Query: 1290 LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 1111
LF++GGDDYK+ +W L +L GH + +V F +++ + I++W+ +
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 1110 RTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+ TGH FHP + + S S D +++WDI
Sbjct: 90 AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 129
>TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding |
chr1:3733406-3739363 FORWARD
Length = 1022
Score = 97 bits (241), Expect = 2e-020
Identities = 46/153 (30%), Positives = 75/153 (49%)
Frame = -2
Query: 1449 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQPLFVSGGD 1270
V ++F+S+ +LA SGVI+LWD ++ F H V FH SG
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 1269 DYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL 1090
D ++VW+ + C+ T GH I T++F + W+VS D +++W+ + +
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 1089 TGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
H + FHP E L+ + S D+TV+ WD+
Sbjct: 181 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 94 bits (232), Expect = 2e-019
Identities = 43/166 (25%), Positives = 76/166 (45%)
Frame = -2
Query: 1488 PTMLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 1309
P + S+ + ++F + + A SG I+LWD ++ H V+
Sbjct: 49 PNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVN 108
Query: 1308 FHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 1129
FH F SG D +K+W+ + C+ T GH + ++F + WIVS +D ++
Sbjct: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVK 168
Query: 1128 IWNWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+W+ + + H + FHP E L+ + S D+TV+ WD+
Sbjct: 169 VWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 69 bits (167), Expect = 8e-012
Identities = 30/104 (28%), Positives = 53/104 (50%)
Frame = -2
Query: 1302 QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 1123
+S + V+GG+D+K+ +W + +L GH I +V F + + + TI++W
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLW 86
Query: 1122 NWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+ + + LTGH + FHP + S SLD +++WDI
Sbjct: 87 DLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
>TAIR9_protein||AT3G49660.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr3:18413690-18415223 FORWARD
Length = 318
Score = 82 bits (201), Expect = 9e-016
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Frame = -2
Query: 1335 HDGPVRGVHFHQSQPLFVSGGDD-----YKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHE 1171
H+ V V F L S D Y I N + + GH + I V F +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 1170 NPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+IVSASDD+T+++W+ ++ + I L GH +Y C F+P+ +++VS S D+TVR+WD+
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
Query: 990 GALKKKSASPA 958
K PA
Sbjct: 143 TTGKCLKVLPA 153
>TAIR9_protein||AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671133-5675106 FORWARD
Length = 480
Score = 82 bits (200), Expect = 1e-015
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = -2
Query: 1335 HDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIV 1156
H G VR V F S F +G D IK+W+ TL GH+ +R + + + ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMF 228
Query: 1155 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDIGALKK 976
SA DD+ ++ W+ + I GH H V C HP D+V++ D RVWDI +
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 975 KSASPAD-DILRLSQMNTD---FFGGVDAVVKY 889
P D D+ + TD G D+ +K+
Sbjct: 289 IFVLPHDSDVFSVLARPTDPQVITGSHDSTIKF 321
>TAIR9_protein||AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); basal transcription repressor/ nucleotide binding / protein binding
| chr4:9023775-9027443 FORWARD
Length = 487
Score = 78 bits (190), Expect = 2e-014
Identities = 41/148 (27%), Positives = 74/148 (50%)
Frame = -2
Query: 1452 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQPLFVSGG 1273
+V+GL+ ++ ++ ++ ++ WD +I + H V + H + + ++GG
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 1272 DDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISV 1093
D +VW+ + +F L GH + + +V +P +V+ S D TI+ W+ + +S
Sbjct: 280 RDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMST 339
Query: 1092 LTGHNHYVMCATFHPKEDLVVSASLDQT 1009
LT H V T HPKE+ SAS D T
Sbjct: 340 LTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 75 bits (184), Expect = 8e-014
Identities = 37/115 (32%), Positives = 57/115 (49%)
Frame = -2
Query: 1335 HDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIV 1156
H G VR V F S F +G D IK+W+ TL GH++ +R + + + ++
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMF 234
Query: 1155 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
SA DD+ ++ W+ + I GH V C HP D++++ D RVWDI
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
>TAIR9_protein||AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 648
Score = 76 bits (185), Expect = 6e-014
Identities = 40/140 (28%), Positives = 65/140 (46%)
Frame = -2
Query: 1413 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLH 1234
++ SG LW+ + HD P+R + + ++ VSG D +K W ++
Sbjct: 138 LITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMN 197
Query: 1233 RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCATF 1054
H + IR + F + S SDD T+++W++ S LTGH V +
Sbjct: 198 NVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGHGWDVKSVDW 257
Query: 1053 HPKEDLVVSASLDQTVRVWD 994
HP + L+VS DQ V++WD
Sbjct: 258 HPTKSLLVSGGKDQLVKLWD 277
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 69 bits (166), Expect = 1e-011
Identities = 30/104 (28%), Positives = 53/104 (50%)
Frame = -2
Query: 1302 QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 1123
+S + V+GG+D+K+ +W + +L GH I +V F + + + TI++W
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Query: 1122 NWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDI 991
+ + + LTGH + FHP + S SLD +++WDI
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,411,387,618
Number of Sequences: 33410
Number of Extensions: 14411387618
Number of Successful Extensions: 630637304
Number of sequences better than 0.0: 0
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