SwissProt blast output of UN70158
BLASTX 7.6.2
Query= UN70158 /QuerySize=800
(799 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9NW08|RPC2_HUMAN DNA-directed RNA polymerase III subunit RPC... 196 2e-049
sp|P59470|RPC2_MOUSE DNA-directed RNA polymerase III subunit RPC... 196 2e-049
sp|P22276|RPC2_YEAST DNA-directed RNA polymerase III subunit RPC... 194 7e-049
sp|P25167|RPC2_DROME DNA-directed RNA polymerase III subunit RPC... 186 1e-046
sp|Q10233|RPC2_SCHPO DNA-directed RNA polymerase III subunit RPC... 185 4e-046
sp|Q54IZ9|RPC2_DICDI DNA-directed RNA polymerase III subunit rpc... 182 4e-045
sp|P38420|RPB2_ARATH DNA-directed RNA polymerase II subunit RPB2... 162 4e-039
sp|Q42877|RPB2_SOLLC DNA-directed RNA polymerase II subunit RPB2... 161 9e-039
sp|P30876|RPB2_HUMAN DNA-directed RNA polymerase II subunit RPB2... 158 4e-038
sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II subunit RPB2... 158 4e-038
sp|Q10578|RPB2_CAEEL DNA-directed RNA polymerase II subunit RPB2... 154 6e-037
sp|A5DHT2|RPB2_PICGU DNA-directed RNA polymerase II subunit RPB2... 154 8e-037
sp|P08266|RPB2_DROME DNA-directed RNA polymerase II subunit RPB2... 154 1e-036
sp|Q54J75|RPB2_DICDI DNA-directed RNA polymerase II subunit rpb2... 153 2e-036
sp|Q02061|RPB2_SCHPO DNA-directed RNA polymerase II subunit RPB2... 150 2e-035
sp|Q753Q4|RPB2_ASHGO DNA-directed RNA polymerase II subunit RPB2... 146 2e-034
sp|Q8SR75|RPB2_ENCCU DNA-directed RNA polymerase II subunit RPB2... 146 2e-034
sp|P08518|RPB2_YEAST DNA-directed RNA polymerase II subunit RPB2... 146 2e-034
sp|Q6FLD5|RPB2_CANGA DNA-directed RNA polymerase II subunit RPB2... 146 3e-034
sp|B0R8D5|RPOB1_HALS3 DNA-directed RNA polymerase subunit B' OS=... 137 1e-031
>sp|Q9NW08|RPC2_HUMAN DNA-directed RNA polymerase III subunit RPC2 OS=Homo
sapiens GN=POLR3B PE=1 SV=2
Length = 1133
Score = 196 bits (497), Expect = 2e-049
Identities = 93/136 (68%), Positives = 111/136 (81%), Gaps = 6/136 (4%)
Frame = -2
Query: 408 LTT*ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVG 229
+T+ ITG PL+AYI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEGRSR+GGLR+G
Sbjct: 989 VTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLG 1048
Query: 228 EMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNIS 49
EMERDCLI YG S L+ ERLMISSD FEV VC +CGLLGY + C CK+ ++S
Sbjct: 1049 EMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVS 1102
Query: 48 SMKLPYACKLLFQELQ 1
S+++PYACKLLFQELQ
Sbjct: 1103 SLRIPYACKLLFQELQ 1118
>sp|P59470|RPC2_MOUSE DNA-directed RNA polymerase III subunit RPC2 OS=Mus
musculus GN=Polr3b PE=2 SV=2
Length = 1133
Score = 196 bits (497), Expect = 2e-049
Identities = 93/136 (68%), Positives = 111/136 (81%), Gaps = 6/136 (4%)
Frame = -2
Query: 408 LTT*ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVG 229
+T+ ITG PL+AYI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEGRSR+GGLR+G
Sbjct: 989 VTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLG 1048
Query: 228 EMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNIS 49
EMERDCLI YG S L+ ERLMISSD FEV VC +CGLLGY + C CK+ ++S
Sbjct: 1049 EMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVS 1102
Query: 48 SMKLPYACKLLFQELQ 1
S+++PYACKLLFQELQ
Sbjct: 1103 SLRIPYACKLLFQELQ 1118
>sp|P22276|RPC2_YEAST DNA-directed RNA polymerase III subunit RPC2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RET1 PE=1
SV=2
Length = 1149
Score = 194 bits (492), Expect = 7e-049
Identities = 94/131 (71%), Positives = 106/131 (80%), Gaps = 6/131 (4%)
Frame = -2
Query: 396 ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMER 217
ITG LQAYIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEGRSR+GGLR+GEMER
Sbjct: 1008 ITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMER 1067
Query: 216 DCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKL 37
DC+IAYG S L+ ERLMISSD FEV VC KCGL+GY + C+TCK+ +NI M +
Sbjct: 1068 DCVIAYGASQLLLERLMISSDAFEVDVCDKCGLMGYSGW------CTTCKSAENIIKMTI 1121
Query: 36 PYACKLLFQEL 4
PYA KLLFQEL
Sbjct: 1122 PYAAKLLFQEL 1132
>sp|P25167|RPC2_DROME DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila
melanogaster GN=RpIII128 PE=2 SV=2
Length = 1137
Score = 186 bits (472), Expect = 1e-046
Identities = 87/131 (66%), Positives = 104/131 (79%), Gaps = 6/131 (4%)
Frame = -2
Query: 396 ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMER 217
ITGTPL+AYI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+GRSR GGLR+GEMER
Sbjct: 999 ITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMER 1058
Query: 216 DCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKL 37
DCLI+YG S LI ERLMISSD FEV VCR CG + Y ++ C C++ N+S + +
Sbjct: 1059 DCLISYGASMLIMERLMISSDAFEVDVCRTCGRMAYCSW------CHFCQSSANVSKISM 1112
Query: 36 PYACKLLFQEL 4
PYACKLLFQEL
Sbjct: 1113 PYACKLLFQEL 1123
>sp|Q10233|RPC2_SCHPO DNA-directed RNA polymerase III subunit RPC2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpc2 PE=2
SV=1
Length = 1165
Score = 185 bits (468), Expect = 4e-046
Identities = 90/135 (66%), Positives = 107/135 (79%), Gaps = 6/135 (4%)
Frame = -2
Query: 408 LTT*ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVG 229
LT+ ITG L+AYIFMGPIYYQKLKHMV+DKMHAR GPR ++TRQPTEGRSR+GGLR+G
Sbjct: 1020 LTSGITGETLEAYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLG 1079
Query: 228 EMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNIS 49
EMERDCLIAYG S L+ ERLMISSD +V VC +CGLLGY + C++C++ +
Sbjct: 1080 EMERDCLIAYGASQLLLERLMISSDACDVDVCGQCGLLGYKGW------CNSCQSTREVV 1133
Query: 48 SMKLPYACKLLFQEL 4
M +PYA KLLFQEL
Sbjct: 1134 KMTIPYAAKLLFQEL 1148
>sp|Q54IZ9|RPC2_DICDI DNA-directed RNA polymerase III subunit rpc2
OS=Dictyostelium discoideum GN=polr3b PE=3 SV=1
Length = 1608
Score = 182 bits (460), Expect = 4e-045
Identities = 87/136 (63%), Positives = 103/136 (75%), Gaps = 6/136 (4%)
Frame = -2
Query: 408 LTT*ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVG 229
+T+ +TG PL +IF GPI+YQKLKHMV+DKMHAR GP +TRQPTEGR+R GGLR+G
Sbjct: 1466 VTSGVTGEPLACFIFFGPIFYQKLKHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLG 1525
Query: 228 EMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNIS 49
EMERDCLI YG S LI ERLMISSD F V C+ CG LGY Y C CK+ +IS
Sbjct: 1526 EMERDCLIGYGASALIMERLMISSDRFTVYACKNCGFLGYEGY------CQYCKSSVDIS 1579
Query: 48 SMKLPYACKLLFQELQ 1
++++PYACKLLFQELQ
Sbjct: 1580 TIQIPYACKLLFQELQ 1595
>sp|P38420|RPB2_ARATH DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis
thaliana GN=RPB135 PE=2 SV=2
Length = 1188
Score = 162 bits (408), Expect = 4e-039
Identities = 75/130 (57%), Positives = 94/130 (72%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG PL A IF+GP YYQ+LKHMV DK+H+RG GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1038 TGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1097
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C+IA+G ++ + ERL SD + V VC CGL+ N + + C CK +I + +P
Sbjct: 1098 CMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1157
Query: 33 YACKLLFQEL 4
YACKLLFQEL
Sbjct: 1158 YACKLLFQEL 1167
>sp|Q42877|RPB2_SOLLC DNA-directed RNA polymerase II subunit RPB2 OS=Solanum
lycopersicum GN=RPB2 PE=2 SV=1
Length = 1191
Score = 161 bits (405), Expect = 9e-039
Identities = 74/130 (56%), Positives = 94/130 (72%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A IF+GP YYQ+LKHMV DK+H+RG GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1037 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1096
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C+IA+G ++ + ERL SD + V VC +CGL+ N + + C CK +I + +P
Sbjct: 1097 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1156
Query: 33 YACKLLFQEL 4
YACKLLFQEL
Sbjct: 1157 YACKLLFQEL 1166
>sp|P30876|RPB2_HUMAN DNA-directed RNA polymerase II subunit RPB2 OS=Homo
sapiens GN=POLR2B PE=1 SV=1
Length = 1174
Score = 158 bits (399), Expect = 4e-038
Identities = 72/130 (55%), Positives = 94/130 (72%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG + + IF+GP YYQ+LKHMV DK+H+R GP Q++ RQP EGRSR+GGLR GEMERD
Sbjct: 1033 TGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERD 1092
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C IA+G + + ERL +SDP++V VC CG++ N +T T C C+ IS +++P
Sbjct: 1093 CQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMP 1152
Query: 33 YACKLLFQEL 4
YACKLLFQEL
Sbjct: 1153 YACKLLFQEL 1162
>sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II subunit RPB2 OS=Mus
musculus GN=Polr2b PE=2 SV=2
Length = 1174
Score = 158 bits (399), Expect = 4e-038
Identities = 72/130 (55%), Positives = 94/130 (72%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG + + IF+GP YYQ+LKHMV DK+H+R GP Q++ RQP EGRSR+GGLR GEMERD
Sbjct: 1033 TGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERD 1092
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C IA+G + + ERL +SDP++V VC CG++ N +T T C C+ IS +++P
Sbjct: 1093 CQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMP 1152
Query: 33 YACKLLFQEL 4
YACKLLFQEL
Sbjct: 1153 YACKLLFQEL 1162
>sp|Q10578|RPB2_CAEEL DNA-directed RNA polymerase II subunit RPB2
OS=Caenorhabditis elegans GN=rpb-2 PE=2 SV=2
Length = 1193
Score = 154 bits (389), Expect = 6e-037
Identities = 70/130 (53%), Positives = 91/130 (70%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L IF GP YYQ+LKHMV DK+H+R GP Q++ RQP EGR+R+GGLR GEMERD
Sbjct: 1039 TGKKLTTQIFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERD 1098
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C I++G + + ERL SDP+ V VC CGL+ N +T + C C+ +S++++P
Sbjct: 1099 CQISHGATQFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIP 1158
Query: 33 YACKLLFQEL 4
YACKLLFQEL
Sbjct: 1159 YACKLLFQEL 1168
>sp|A5DHT2|RPB2_PICGU DNA-directed RNA polymerase II subunit RPB2 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=RPB2 PE=3 SV=3
Length = 1236
Score = 154 bits (388), Expect = 8e-037
Identities = 75/131 (57%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A +F GP YYQ+L+HMV DK+HAR GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1086 TGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERD 1145
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYI-NYQTKTRVCSTCKTGDNISSMKL 37
C+IA+G + + ERLM +SD F V VC CGL+ I N + C +CK NI + +
Sbjct: 1146 CMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRSCKNKTNIYQIHI 1205
Query: 36 PYACKLLFQEL 4
PYA KLLFQEL
Sbjct: 1206 PYAAKLLFQEL 1216
>sp|P08266|RPB2_DROME DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila
melanogaster GN=RpII140 PE=2 SV=2
Length = 1176
Score = 154 bits (387), Expect = 1e-036
Identities = 70/130 (53%), Positives = 90/130 (69%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG + A +F+GP YYQ+LKHMV DK+H+R GP Q++ RQP EGR+R+GGLR GEMERD
Sbjct: 1035 TGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERD 1094
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C I++G + + ERL SDP+ V +C CGL+ N + T C CK IS ++LP
Sbjct: 1095 CQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLP 1154
Query: 33 YACKLLFQEL 4
YA KLLFQEL
Sbjct: 1155 YAAKLLFQEL 1164
>sp|Q54J75|RPB2_DICDI DNA-directed RNA polymerase II subunit rpb2
OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1
Length = 1170
Score = 153 bits (384), Expect = 2e-036
Identities = 70/130 (53%), Positives = 91/130 (70%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG + A IF+GP YYQ+LKHMV DK+H+R GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1028 TGRRMDAQIFIGPTYYQRLKHMVDDKIHSRSRGPVQILTRQPVEGRSRDGGLRFGEMERD 1087
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C+I++G + + ERL SD + V +C CGL+ N + + C CK IS +++P
Sbjct: 1088 CMISHGAAQFLKERLFDQSDSYRVHICDICGLIAIANLKKNSFECRRCKNKTQISQIRMP 1147
Query: 33 YACKLLFQEL 4
YA KLLFQEL
Sbjct: 1148 YAAKLLFQEL 1157
>sp|Q02061|RPB2_SCHPO DNA-directed RNA polymerase II subunit RPB2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpb2 PE=1
SV=2
Length = 1210
Score = 150 bits (377), Expect = 2e-035
Identities = 71/130 (54%), Positives = 92/130 (70%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A +F+GP YYQ+LKH+V DK+HAR GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1066 TGRKLVAQVFLGPTYYQRLKHLVDDKIHARARGPVQILTRQPVEGRSRDGGLRFGEMERD 1125
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKLP 34
C I++G S+++ ERL SD + V VC CGL+ +Y+ + C +C+ S + LP
Sbjct: 1126 CQISHGCSSVLRERLFDCSDAYRVIVCDICGLIAIASYKKDSYECRSCQNRTRFSQVYLP 1185
Query: 33 YACKLLFQEL 4
YA KLLFQEL
Sbjct: 1186 YAAKLLFQEL 1195
>sp|Q753Q4|RPB2_ASHGO DNA-directed RNA polymerase II subunit RPB2 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPB2 PE=3 SV=1
Length = 1222
Score = 146 bits (367), Expect = 2e-034
Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A IF GP YYQ+L+HMV DK+HAR GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1075 TGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERD 1134
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYI-NYQTKTRVCSTCKTGDNISSMKL 37
C+IA+G + + ERLM +SD F V +C CGL+ + + C CK +I + +
Sbjct: 1135 CMIAHGAAAFLKERLMEASDAFRVHICGICGLMTVVAKLKHNQFECRGCKNKIDIYQVHI 1194
Query: 36 PYACKLLFQEL 4
PYA KLLFQEL
Sbjct: 1195 PYAAKLLFQEL 1205
>sp|Q8SR75|RPB2_ENCCU DNA-directed RNA polymerase II subunit RPB2
OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPB2 PE=3 SV=1
Length = 1141
Score = 146 bits (367), Expect = 2e-034
Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Frame = -2
Query: 396 ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMER 217
+TG L+A +F GP YYQ+LKHMV DK+HAR GP Q++TRQP EGRSR+GGLR GEMER
Sbjct: 1000 MTGRKLRAQMFFGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMER 1059
Query: 216 DCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKL 37
DC+I++G S + ERLM SD + VC CGLL +K C C N+S +++
Sbjct: 1060 DCIISHGASAFLKERLMDVSDAYSCYVCDFCGLLAMGG--SKVNECKGCNNTTNVSMVEI 1117
Query: 36 PYACKLLFQEL 4
PYA KLL QEL
Sbjct: 1118 PYAFKLLIQEL 1128
>sp|P08518|RPB2_YEAST DNA-directed RNA polymerase II subunit RPB2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPB2 PE=1
SV=2
Length = 1224
Score = 146 bits (367), Expect = 2e-034
Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A IF GP YYQ+L+HMV DK+HAR GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1077 TGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERD 1136
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRV-CSTCKTGDNISSMKL 37
C+IA+G ++ + ERLM +SD F V +C CGL+ I + C C +I + +
Sbjct: 1137 CMIAHGAASFLKERLMEASDAFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHI 1196
Query: 36 PYACKLLFQEL 4
PYA KLLFQEL
Sbjct: 1197 PYAAKLLFQEL 1207
>sp|Q6FLD5|RPB2_CANGA DNA-directed RNA polymerase II subunit RPB2 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL
Y-65) GN=RPB2 PE=3 SV=1
Length = 1223
Score = 146 bits (366), Expect = 3e-034
Identities = 72/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Frame = -2
Query: 393 TGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMERD 214
TG L A IF GP YYQ+L+HMV DK+HAR GP Q++TRQP EGRSR+GGLR GEMERD
Sbjct: 1076 TGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERD 1135
Query: 213 CLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRV-CSTCKTGDNISSMKL 37
C+IA+G + + ERLM +SD F V +C CGL+ I + C C +I + +
Sbjct: 1136 CMIAHGAAAFLKERLMEASDAFRVHICGICGLMSVIAKLNHNQFECKGCDNKIDIYQIHI 1195
Query: 36 PYACKLLFQEL 4
PYA KLLFQEL
Sbjct: 1196 PYAAKLLFQEL 1206
>sp|B0R8D5|RPOB1_HALS3 DNA-directed RNA polymerase subunit B' OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpoB1 PE=1 SV=1
Length = 608
Score = 137 bits (344), Expect = 1e-031
Identities = 63/132 (47%), Positives = 92/132 (69%)
Frame = -2
Query: 396 ITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGMGPRQLITRQPTEGRSRNGGLRVGEMER 217
++G ++A IF+G I+Y KL HMV +K+HAR GP Q++TRQPTEGR+R GGLRVGEMER
Sbjct: 463 VSGEKIEAEIFVGTIFYHKLYHMVSNKLHARSKGPVQVLTRQPTEGRAREGGLRVGEMER 522
Query: 216 DCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTRVCSTCKTGDNISSMKL 37
D +I +G + ++ ERL+ SSD E+ VC CG+ NY+ + C C+ ++ S+++
Sbjct: 523 DTVIGHGAAMVLKERLLDSSDREEIHVCGNCGMTAVENYEQRRVYCPNCEEETDVHSIEM 582
Query: 36 PYACKLLFQELQ 1
YA KLL E++
Sbjct: 583 SYAFKLLLDEMK 594
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,960,835,034
Number of Sequences: 537505
Number of Extensions: 111960835034
Number of Successful Extensions: 642820590
Number of sequences better than 0.0: 0
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