Chrysanthenum transcriptome database

Arabidopsis blast output of UN65644


BLASTX 7.6.2

Query= UN65644 /QuerySize=696
        (695 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G05500.1 | Symbols:  | rubber elongation facto...    173   2e-043
TAIR9_protein||AT2G47780.1 | Symbols:  | rubber elongation facto...    107   6e-024
TAIR9_protein||AT1G67360.2 | Symbols:  | rubber elongation facto...    101   8e-022
TAIR9_protein||AT1G67360.1 | Symbols:  | rubber elongation facto...    101   8e-022

>TAIR9_protein||AT3G05500.1 | Symbols:  | rubber elongation factor (REF) family
        protein | chr3:1593540-1594802 FORWARD

          Length = 247

 Score =  173 bits (436), Expect = 2e-043
 Identities = 88/164 (53%), Positives = 111/164 (67%), Gaps = 8/164 (4%)
 Frame = -2

Query: 484 SDTDIPITTQPEIESEQERLKYLEFVQVAVLHALLYASKVYCYAKENSGPLKPGVETIEG 305
           + TD+        + E+ERLKYL+FVQ A + ALL  + +Y  AK+ SGPLKPGVE++EG
Sbjct:   3 TQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEG 62

Query: 304 TLKTVVGPAYDKFHDVPVEVLKFVDRKVDESVTKFDSRVPPFVKQVXXXXXXXX------ 143
            +KTVVGP Y+K+HDVPVEVLK++D+KVD SVT+ D RVPP VKQV              
Sbjct:  63 AVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIV 122

Query: 142 --XXXXEVKSAGVVETASGLTKTAYTKLEPTAKGLYAKYEPTAK 17
                 EV+ AGVVETASG+ K+ Y+K EP AK LYA YEP A+
Sbjct: 123 ARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAE 166

>TAIR9_protein||AT2G47780.1 | Symbols:  | rubber elongation factor (REF)
        protein-related | chr2:19570076-19570864 FORWARD

          Length = 236

 Score =  107 bits (267), Expect = 6e-024
 Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
 Frame = -2

Query: 445 ESEQERLKYLEFVQVAVLHALLYASKVYCYAKENSGPLKPGVETIEGTLKTVVGPAYDKF 266
           + ++ +LK+LEF+QVA ++     S +Y  AK+N+GPLK GVE IE  ++TV+ P Y+KF
Sbjct:  35 DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKF 94

Query: 265 HDVPVEVLKFVDRKVDESVTKFDSRVPPFVKQVXXXXXXXXXXXXEVKSAGVVETASGLT 86
           HDVP ++L FVDRKVD+     ++ VP  VKQ             EV+  GVV+T   + 
Sbjct:  95 HDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQ---ASSQALTVATEVQRTGVVDTTKSIA 151

Query:  85 KTAYTKLEPTAK 50
           ++   K EP A+
Sbjct: 152 RSVRDKYEPAAE 163

>TAIR9_protein||AT1G67360.2 | Symbols:  | rubber elongation factor (REF) family
        protein | chr1:25237072-25237913 REVERSE

          Length = 241

 Score =  101 bits (249), Expect = 8e-022
 Identities = 53/123 (43%), Positives = 69/123 (56%)
 Frame = -2

Query: 442 SEQERLKYLEFVQVAVLHALLYASKVYCYAKENSGPLKPGVETIEGTLKTVVGPAYDKFH 263
           S++  LK+L FV++A +H L   S +Y YAK+NSGPLK  VE +EG + TVV P Y KF 
Sbjct:   8 SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 262 DVPVEVLKFVDRKVDESVTKFDSRVPPFVKQVXXXXXXXXXXXXEVKSAGVVETASGLTK 83
           DVP  +L F+D KV E   KFD   PP  K+V            E   + V E  +G  K
Sbjct:  68 DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query:  82 TAY 74
            A+
Sbjct: 128 AAF 130

>TAIR9_protein||AT1G67360.1 | Symbols:  | rubber elongation factor (REF) family
        protein | chr1:25237072-25237913 REVERSE

          Length = 241

 Score =  101 bits (249), Expect = 8e-022
 Identities = 53/123 (43%), Positives = 69/123 (56%)
 Frame = -2

Query: 442 SEQERLKYLEFVQVAVLHALLYASKVYCYAKENSGPLKPGVETIEGTLKTVVGPAYDKFH 263
           S++  LK+L FV++A +H L   S +Y YAK+NSGPLK  VE +EG + TVV P Y KF 
Sbjct:   8 SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 262 DVPVEVLKFVDRKVDESVTKFDSRVPPFVKQVXXXXXXXXXXXXEVKSAGVVETASGLTK 83
           DVP  +L F+D KV E   KFD   PP  K+V            E   + V E  +G  K
Sbjct:  68 DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query:  82 TAY 74
            A+
Sbjct: 128 AAF 130

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,357,021,289
Number of Sequences: 33410
Number of Extensions: 13357021289
Number of Successful Extensions: 585109669
Number of sequences better than 0.0: 0