Chrysanthenum transcriptome database

SwissProt blast output of UN56529


BLASTX 7.6.2

Query= UN56529 /QuerySize=891
        (890 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q42463|DCL_SOLLC Protein DCL, chloroplastic OS=Solanum lycope...    228   5e-059
sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase E subunit 1 OS...    102   3e-021

>sp|Q42463|DCL_SOLLC Protein DCL, chloroplastic OS=Solanum lycopersicum GN=DCL
        PE=2 SV=1

          Length = 224

 Score =  228 bits (580), Expect = 5e-059
 Identities = 105/120 (87%), Positives = 113/120 (94%)
 Frame = -2

Query: 550 WEDQILEDTVPLVGFVRMILHSGKYASGERLSPEHERTILERLLPHHPESEKKIGCGVSY 371
           WEDQILEDTVPLVGFVRMILHSGKYA G+RLSP+H+RTIL+RLLP+HPE +KKIG GV Y
Sbjct: 105 WEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDY 164

Query: 370 ITVGYHPDFESSRCLFIVRTDGEMVDFSYWKCIKGLIRKNYPLYADSFILRHFRRRRHND 191
           ITVGYHPDFE+SRCLFIVR DGE VDFSYWKCIKGLIRKNYPLYADSFILRHFR+RR ND
Sbjct: 165 ITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRND 224

>sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase E subunit 1 OS=Arabidopsis
        thaliana GN=NRPE1 PE=1 SV=1

          Length = 1976

 Score =  102 bits (254), Expect = 3e-021
 Identities = 51/158 (32%), Positives = 79/158 (50%)
 Frame = -2

Query:  673 TTSGGGQYEGGAADLLRKPVVKEXXXXXXXXXXXXXXXXXXWEDQILEDTVPLVGFVRMI 494
            +  GG  ++G      R P  ++                   E ++L D  P++  +R I
Sbjct: 1694 SNGGGADWKGNRNHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKI 1753

Query:  493 LHSGKYASGERLSPEHERTILERLLPHHPESEKKIGCGVSYITVGYHPDFESSRCLFIVR 314
            +H   Y  G+ +S + +  +LE++L  HP+ E K+G GV +ITV  H  F  SRC F+V 
Sbjct: 1754 MHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVS 1813

Query:  313 TDGEMVDFSYWKCIKGLIRKNYPLYADSFILRHFRRRR 200
            TDG   DFSY K +   + K YP  A+ FI ++F + R
Sbjct: 1814 TDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPR 1851

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,608,607,123
Number of Sequences: 537505
Number of Extensions: 82608607123
Number of Successful Extensions: 482623804
Number of sequences better than 0.0: 0