GenBank blast output of UN54596
BLASTX 7.6.2
Query= UN54596 /QuerySize=675
(674 letters)
Database: GenBank nr;
20,571,509 sequences; 7,061,663,739 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|302142695|emb|CBI19898.3| unnamed protein product [Vitis vini... 124 2e-026
gi|224123076|ref|XP_002318989.1| predicted protein [Populus tric... 122 5e-026
gi|326511037|dbj|BAJ91866.1| predicted protein [Hordeum vulgare ... 120 3e-025
gi|357465637|ref|XP_003603103.1| DNA-directed RNA polymerase I s... 116 6e-024
gi|18404735|ref|NP_566786.1| TFIIB zinc-binding protein [Arabido... 115 8e-024
gi|312281609|dbj|BAJ33670.1| unnamed protein product [Thellungie... 114 2e-023
gi|13324793|gb|AAK18841.1|AC082645_11 putative RNA polymerase I ... 112 7e-023
gi|351723413|ref|NP_001236766.1| uncharacterized protein LOC1005... 112 7e-023
gi|356572419|ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN:... 106 5e-021
gi|168480799|gb|ACA24493.1| TFIIS domain-containing protein [Cuc... 105 8e-021
>gi|302142695|emb|CBI19898.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 124 bits (309), Expect = 2e-026
Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Frame = -2
Query: 571 QSDFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELG----- 407
Q DFMFC +CGTML + Y CPLCKSR+K+KD G EI+YTVS E IRREL
Sbjct: 6 QRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIEPFV 65
Query: 406 -LSSIEISGERTRSMDYNVRCPKC-SNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 233
L I ++ RC +C + +YY+T+Q RSADEGQT+FY C CG+ ++ N
Sbjct: 66 KLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGHKWSQN 125
Query: 232 T 230
T
Sbjct: 126 T 126
>gi|224123076|ref|XP_002318989.1| predicted protein [Populus trichocarpa]
Length = 117
Score = 122 bits (306), Expect = 5e-026
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DFMFC++CGTM+ K +V CPLCK +K KD EI Y VS E +RR+LG+S E
Sbjct: 8 DFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLGISHFEGK 67
Query: 385 GERTRSMDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 233
E + M+ N +C KC + + + T+Q RSADEGQT F++C NC Y FT+N
Sbjct: 68 ME-VKDMEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTEN 117
>gi|326511037|dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 125
Score = 120 bits (299), Expect = 3e-025
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 8/119 (6%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC +CGT+L FN Y CPLC ++K KD +G E +Y V+ E IRREL + +
Sbjct: 8 DFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELKIKPFVVL 67
Query: 385 GERTRSMDYNVR-------CPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDNT 230
E ++D V+ CPKC++ + Y+T+Q RSADEGQT+FY CP CG+ F +NT
Sbjct: 68 -ESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHAFNENT 125
>gi|357465637|ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12
[Medicago truncatula]
Length = 115
Score = 116 bits (288), Expect = 6e-024
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC +CGTML+ Y CPLCK++ IKD G EI YT+S E IRRELG+ IE
Sbjct: 7 DFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGIDLIE-- 64
Query: 385 GERTRSMDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTD 236
++ + N C KC + ++T+Q RSADEGQT FY C CG+ F +
Sbjct: 65 EQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQE 114
>gi|18404735|ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
Length = 119
Score = 115 bits (287), Expect = 8e-024
Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
Frame = -2
Query: 571 QSDFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIE 392
+S+F+FC +CGTML Y CP CK+ + KD EI YTVS E IRRELG+S
Sbjct: 6 ESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELGIS--- 62
Query: 391 ISGERTRS----MDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTD 236
+ GE+T++ C KC + + Y T+QTRSADEGQT +Y CPNC + FT+
Sbjct: 63 LFGEKTQAEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118
>gi|312281609|dbj|BAJ33670.1| unnamed protein product [Thellungiella halophila]
Length = 119
Score = 114 bits (284), Expect = 2e-023
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Frame = -2
Query: 571 QSDFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIE 392
+S F+FC +CGTML + CPLC++ + K+ G +I YTVS E IRRELG+S
Sbjct: 6 ESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKDIAYTVSAEDIRRELGIS--- 62
Query: 391 ISGERTRS----MDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTD 236
+ GE+T+ C KC + + Y T+QTRSADEGQT +Y CPNCG+ FT+
Sbjct: 63 LFGEKTQEDAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 118
>gi|13324793|gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza
sativa Japonica Group]
Length = 126
Score = 112 bits (279), Expect = 7e-023
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC +CGT+L F+ CPLC ++K KD +G E +YTV+ E IRREL L I
Sbjct: 8 DFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELKLDPYVIL 67
Query: 385 GERTRSMD-------YNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 233
+ D N C KC N + Y+T+Q RSADEGQT+FY C NC + F +N
Sbjct: 68 ETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 125
>gi|351723413|ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine
max]
Length = 116
Score = 112 bits (279), Expect = 7e-023
Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC +CGTML+ Y CPLCK+R+ I+D EI +T+S+E IRRELG+ IE
Sbjct: 7 DFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELGMEIIEEH 66
Query: 385 GERTRSMDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 233
S + +C KC + Y+T+Q RSADEGQT FY C CG+ +N
Sbjct: 67 AVMEYS-KVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116
>gi|356572419|ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed
RNA polymerase I subunit RPA12-like [Glycine max]
Length = 116
Score = 106 bits (263), Expect = 5e-021
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC +CGT+L+ Y CPLCK+ + ++D EI +T+ +E IR+ELG+ IE
Sbjct: 7 DFLFCHLCGTLLTVPSTEYAQCPLCKTHRDMQDVCDKEISFTIHDEDIRKELGMEIIE-- 64
Query: 385 GERTRSMDYNVRCPKCSNKG---VYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 233
E T M+Y+ C KC G Y+T+Q RSADEGQT FY C CG+ +N
Sbjct: 65 -EHT-VMEYSXVCKKCGKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116
>gi|168480799|gb|ACA24493.1| TFIIS domain-containing protein [Cucumis sativus]
Length = 116
Score = 105 bits (261), Expect = 8e-021
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = -2
Query: 565 DFMFCEICGTMLSFNKKSYVHCPLCKSRKKIKDFDGMEIKYTVSEEQIRRELGLSSIEIS 386
DF+FC + GTMLSF YV CP CKSR+ K+ G EI YTV+ E+I+++LG+S I+ +
Sbjct: 8 DFLFCNLGGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIKKQLGISLIDEN 67
Query: 385 GERTRSMDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNC 254
+ RC KC N ++ ++Q RSADEGQT FY C C
Sbjct: 68 NMQLAK--ERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCSKC 109
Database: GenBank nr
Posted date: Thu Sep 27 19:07:00 2012
Number of letters in database: 7,061,663,739
Number of sequences in database: 20,571,509
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,954,543,586,162
Number of Sequences: 20571509
Number of Extensions: 2954543586162
Number of Successful Extensions: 889832721
Number of sequences better than 0.0: 0
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