Chrysanthenum transcriptome database

GenBank blast output of UN52839


BLASTX 7.6.2

Query= UN52839 /QuerySize=532
        (531 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|357484843|ref|XP_003612709.1| IWS1-like protein [Medicago tru...     75   4e-012
gi|359479803|ref|XP_002276883.2| PREDICTED: protein IWS1 homolog...     74   1e-011
gi|147865531|emb|CAN83660.1| hypothetical protein VITISV_006539 ...     72   5e-011
gi|356531459|ref|XP_003534295.1| PREDICTED: protein IWS1 homolog...     71   7e-011
gi|255557639|ref|XP_002519849.1| Transcription factor IWS1, puta...     70   1e-010
gi|356496118|ref|XP_003516917.1| PREDICTED: protein IWS1 homolog...     70   2e-010
gi|356496120|ref|XP_003516918.1| PREDICTED: protein IWS1 homolog...     70   2e-010
gi|79356327|ref|NP_174492.2| Transcription elongation factor (TF...     61   9e-008

>gi|357484843|ref|XP_003612709.1| IWS1-like protein [Medicago truncatula]

          Length = 496

 Score =  75 bits (184), Expect = 4e-012
 Identities = 44/80 (55%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           MGYE++PYRDEDGEPLMDYDD  QSD G+ +P  +PQQ  +                S T
Sbjct:   1 MGYEDNPYRDEDGEPLMDYDD-VQSD-GEGSP--EPQQ--LDDFEEEDVDNFHDRARSQT 54

Query: 272 PLYNDSDSKSKPRKRLIKKS 213
           P+Y +  SKSKPRKRLIKKS
Sbjct:  55 PVYENDSSKSKPRKRLIKKS 74

>gi|359479803|ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis
        vinifera]

          Length = 507

 Score =  74 bits (180), Expect = 1e-011
 Identities = 45/89 (50%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXX-XXXXXXXXXXXXSP 276
           MGYENDPYRDEDGEPLMD+D+  QSD      + + Q HL+                 SP
Sbjct:   1 MGYENDPYRDEDGEPLMDFDE-VQSDR-----EVEDQGHLLQDDIPDDNDDDWRRRERSP 54

Query: 275 TPLYNDSD--SKSKPRKRLIKKSTVEESL 195
           TP+Y D    SKSKPRKRL+KKS  E  L
Sbjct:  55 TPVYGDDSGFSKSKPRKRLVKKSAKESPL 83

>gi|147865531|emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis
        vinifera]

          Length = 508

 Score =  72 bits (174), Expect = 5e-011
 Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXX-XXXXXXXXXXXXSP 276
           MGYENDPYRDEDGEPLMD+D+  QSD      + + Q HL+      X          SP
Sbjct:   1 MGYENDPYRDEDGEPLMDFDE-VQSDR-----EVEDQGHLLQDDIPDXNDDDWRRRERSP 54

Query: 275 TPLYNDSD--SKSKPRKRLIKKS 213
           TP+Y D    SKSKPRKRL+KKS
Sbjct:  55 TPVYGDDSGFSKSKPRKRLVKKS 77

>gi|356531459|ref|XP_003534295.1| PREDICTED: protein IWS1 homolog [Glycine max]

          Length = 508

 Score =  71 bits (173), Expect = 7e-011
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           MGYE++PYRDEDGEPLMDYDD  QSD     P  +P+  L                 S T
Sbjct:   1 MGYEDNPYRDEDGEPLMDYDD-VQSDR---EPSPEPRHQL--DDFEEDVDEWRGRDRSQT 54

Query: 272 PLYNDSDSKSKPRKRLIKKS 213
           P+Y+   S+SKPRKRLIKKS
Sbjct:  55 PVYDTDPSRSKPRKRLIKKS 74

>gi|255557639|ref|XP_002519849.1| Transcription factor IWS1, putative [Ricinus
        communis]

          Length = 500

 Score =  70 bits (171), Expect = 1e-010
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           M YE+DPYRDEDGEPLMDYDD         +P+ Q Q+ L+                S T
Sbjct:   1 MAYEDDPYRDEDGEPLMDYDD-------IQSPEPQQQEDLL--EDDVDGWGEQERERSQT 51

Query: 272 PLYNDSDSKSKPRKRLIKKS 213
           P+YN++D   KPRKRL+KKS
Sbjct:  52 PVYNNNDKVEKPRKRLVKKS 71

>gi|356496118|ref|XP_003516917.1| PREDICTED: protein IWS1 homolog isoform 1
        [Glycine max]

          Length = 508

 Score =  70 bits (170), Expect = 2e-010
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           MGYE++PYRDEDGEPLMDYDD  QSD     P  +P++                   S T
Sbjct:   1 MGYEDNPYRDEDGEPLMDYDD-IQSDR---EPSPEPRRQ--DDDFDEDVDEWRGRDRSQT 54

Query: 272 PLYNDSDSKSKPRKRLIKKS 213
           P+Y+   S+SKPRKRLIKKS
Sbjct:  55 PVYDTDPSRSKPRKRLIKKS 74

>gi|356496120|ref|XP_003516918.1| PREDICTED: protein IWS1 homolog isoform 2
        [Glycine max]

          Length = 499

 Score =  70 bits (170), Expect = 2e-010
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           MGYE++PYRDEDGEPLMDYDD  QSD     P  +P++                   S T
Sbjct:   1 MGYEDNPYRDEDGEPLMDYDD-IQSDR---EPSPEPRRQ--DDDFDEDVDEWRGRDRSQT 54

Query: 272 PLYNDSDSKSKPRKRLIKKS 213
           P+Y+   S+SKPRKRLIKKS
Sbjct:  55 PVYDTDPSRSKPRKRLIKKS 74

>gi|79356327|ref|NP_174492.2| Transcription elongation factor (TFIIS) family
        protein [Arabidopsis thaliana]

          Length = 502

 Score =  61 bits (146), Expect = 9e-008
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
 Frame = -2

Query: 452 MGYENDPYRDEDGEPLMDYDDGFQSDHGDDNPQDQPQQHLIXXXXXXXXXXXXXXXXSPT 273
           MG+E+DPYRD DGEP++D+DD F +D     P  +P Q                   S T
Sbjct:   1 MGFEDDPYRDVDGEPIVDFDD-FGNDR---EPSTEPLQDF--DEDLADDIGDWDGEGSQT 54

Query: 272 PLYNDSDSKSKPRKRLIKKSTVE 204
           P+Y D+D  +KPRKRL+KKS+ E
Sbjct:  55 PVY-DNDKVAKPRKRLVKKSSSE 76

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,872,814,657,319
Number of Sequences: 20571509
Number of Extensions: 2872814657319
Number of Successful Extensions: 879270925
Number of sequences better than 0.0: 0