Arabidopsis blast output of UN07649
BLASTX 7.6.2
Query= UN07649 /QuerySize=1301
(1300 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G66010.1 | Symbols: | RNA binding / nucleic a... 175 6e-044
TAIR9_protein||AT3G20890.1 | Symbols: | RNA binding / nucleic a... 162 5e-040
>TAIR9_protein||AT5G66010.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr5:26399612-26400753 FORWARD
Length = 256
Score = 175 bits (443), Expect = 6e-044
Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 17/259 (6%)
Frame = -3
Query: 1223 GREMGLKRQRVVDQGSQYYNAPQASSFIYSPPAYSYVNQPPTFPVVRLRGLPYDVTEADI 1044
G E+G KRQR++ +SF P + Y FPVVRLRGLP++ + DI
Sbjct: 13 GYEVGSKRQRMMQSNPYLAVGTGPTSF----PPFGYAG---GFPVVRLRGLPFNCADIDI 65
Query: 1043 TEFLHGLDIVDVLFANRHGKFQGEVYCVLGYAFQVEYALQKNHQNMGRRYIEVFRSNRQE 864
EF GL+IVDVL +++GKF GE + V QVE ALQ++ NMGRRY+EVFR ++Q+
Sbjct: 66 FEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQD 125
Query: 863 YYKAISNLVTDXXXXXXXXXXXXXXXXXXXXXXXXXXXAHDPAKDNMEHTGVLRLRGLPF 684
YY A++ K+ +E+T VL++RGLP+
Sbjct: 126 YYNAVA----------AEEGAYEYEVRASPPPTGPSRAKRFSEKEKLEYTEVLKMRGLPY 175
Query: 683 TADRDDLVDFFEDWYLAEDSTCFMVNSEGRVTGEAYVKFGSPEVSKAAMVKDGMSLGNRY 504
+ ++ +++FF + + + + +G+ TGEA+V+F + E ++ AM KD MS+G+RY
Sbjct: 176 SVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRY 235
Query: 503 IELFPSTMEEWEEAVTKGR 447
+ELFP+T EE A + R
Sbjct: 236 VELFPTTREEARRAEARSR 254
Score = 95 bits (234), Expect = 1e-019
Identities = 44/96 (45%), Positives = 67/96 (69%)
Frame = -3
Query: 434 KPSEEDTSVLRMRGLPFSAGKDDIVDFFKEFTLTEDSIHITYNSEGRATGEAFVEFTSLE 255
K E T VL+MRGLP+S K I++FF + + + + + +G+ATGEAFVEF + E
Sbjct: 159 KEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGE 218
Query: 254 DSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 147
+++ A+AKD+M++GSRY+ELF ++ EE R A +R R
Sbjct: 219 EARRAMAKDKMSIGSRYVELFPTTREEARRAEARSR 254
Score = 58 bits (138), Expect = 1e-008
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = -3
Query: 410 VLRMRGLPFSAGKDDIVDFFKEFTLTEDSIHITYNSEGRATGEAFVEFTSLEDSKAALAK 231
V+R+RGLPF+ DI +FF + + + + G+ +GEAFV F + AL +
Sbjct: 50 VVRLRGLPFNCADIDIFEFFAGLNIVD---VLLVSKNGKFSGEAFVVFAGPMQVEIALQR 106
Query: 230 DRMTLGSRYIELFMSSPEELRDAVS 156
DR +G RY+E+F S ++ +AV+
Sbjct: 107 DRHNMGRRYVEVFRCSKQDYYNAVA 131
Score = 49 bits (115), Expect = 6e-006
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = -3
Query: 1091 VVRLRGLPYDVTEADITEFLHGLDIVD---VLFANRHGKFQGEVYCVLGYAFQVEYALQK 921
V+++RGLPY V + I EF G ++ + GK GE + + A+ K
Sbjct: 167 VLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAK 226
Query: 920 NHQNMGRRYIEVFRSNRQEYYKA 852
+ ++G RY+E+F + R+E +A
Sbjct: 227 DKMSIGSRYVELFPTTREEARRA 249
>TAIR9_protein||AT3G20890.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7320218-7321054 FORWARD
Length = 279
Score = 162 bits (409), Expect = 5e-040
Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
Frame = -3
Query: 1214 MGLKRQRVVDQG--SQYYNAPQASSFIYSPPAYSYVNQPPTFPVVRLRGLPYDVTEADIT 1041
MG KRQR++DQG +Y +S F+Y+P + PP FP VRLRGLP+D E D+
Sbjct: 1 MGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGLPFDCAELDVV 60
Query: 1040 EFLHGLDIVDVLFANRHGKFQGEVYCVLGYAFQVEYALQKNHQNMGRRYIEVFRSNRQEY 861
EF HGLD+VDVLF +R+ K GE +CVLGY QV++ALQKN QNMGRRY+EVFRS +QEY
Sbjct: 61 EFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSTKQEY 120
Query: 860 YKAISNLVTD 831
YKAI+N V +
Sbjct: 121 YKAIANEVAE 130
Score = 137 bits (344), Expect = 2e-032
Identities = 66/96 (68%), Positives = 79/96 (82%)
Frame = -3
Query: 434 KPSEEDTSVLRMRGLPFSAGKDDIVDFFKEFTLTEDSIHITYNSEGRATGEAFVEFTSLE 255
K E T +LR+RGLPFSAGK+DI+DFFK+F L+ED +H+T N EGR TGEAFVEF + E
Sbjct: 183 KEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRPTGEAFVEFRNAE 242
Query: 254 DSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 147
DS+AA+ KDR TLGSRYIELF SS EEL +A+SRGR
Sbjct: 243 DSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 278
Score = 126 bits (314), Expect = 5e-029
Identities = 59/99 (59%), Positives = 82/99 (82%)
Frame = -3
Query: 743 DPAKDNMEHTGVLRLRGLPFTADRDDLVDFFEDWYLAEDSTCFMVNSEGRVTGEAYVKFG 564
D K+++EHTG+LRLRGLPF+A ++D++DFF+D+ L+ED VN EGR TGEA+V+F
Sbjct: 180 DDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRPTGEAFVEFR 239
Query: 563 SPEVSKAAMVKDGMSLGNRYIELFPSTMEEWEEAVTKGR 447
+ E S+AAMVKD +LG+RYIELFPS++EE EEA+++GR
Sbjct: 240 NAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 278
Score = 56 bits (134), Expect = 4e-008
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = -3
Query: 707 LRLRGLPFTADRDDLVDFFEDWYLAEDSTCFMVNSEGRVTGEAYVKFGSPEVSKAAMVKD 528
+RLRGLPF D+V+FF + + V+ +VTGEA+ G P A+ K+
Sbjct: 45 VRLRGLPFDCAELDVVEFFHGLDVVD---VLFVHRNNKVTGEAFCVLGYPLQVDFALQKN 101
Query: 527 GMSLGNRYIELFPSTMEEWEEAV 459
++G RY+E+F ST +E+ +A+
Sbjct: 102 RQNMGRRYVEVFRSTKQEYYKAI 124
Score = 51 bits (121), Expect = 1e-006
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = -3
Query: 440 VPKPSEEDTSVLRMRGLPFSAGKDDIVDFFKEFTLTEDSIHITYNSEGRATGEAFVEFTS 261
V P +R+RGLPF + D+V+FF + D + + N+ + TGEAF
Sbjct: 34 VAPPPPPPFPAVRLRGLPFDCAELDVVEFFHGLDVV-DVLFVHRNN--KVTGEAFCVLGY 90
Query: 260 LEDSKAALAKDRMTLGSRYIELFMSSPEELRDAVS 156
AL K+R +G RY+E+F S+ +E A++
Sbjct: 91 PLQVDFALQKNRQNMGRRYVEVFRSTKQEYYKAIA 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,006,229,731
Number of Sequences: 33410
Number of Extensions: 3006229731
Number of Successful Extensions: 127538675
Number of sequences better than 0.0: 0
|