Chrysanthenum transcriptome database

SwissProt blast output of UN04833


BLASTX 7.6.2

Query= UN04833 /QuerySize=2046
        (2045 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q7XTT4|NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp. japonic...    196   5e-049
sp|Q9FVQ1|NUCL1_ARATH Nucleolin 1 OS=Arabidopsis thaliana GN=NUC...    191   2e-047
sp|Q1PEP5|NUCL2_ARATH Nucleolin 2 OS=Arabidopsis thaliana GN=NUC...    183   4e-045
sp|Q6Z1C0|NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp. japonic...    170   5e-041
sp|P41891|GAR2_SCHPO Protein gar2 OS=Schizosaccharomyces pombe (...     82   2e-014
sp|Q09295|YQO4_CAEEL Putative RNA-binding protein EEED8.4 OS=Cae...     53   7e-006
sp|Q09301|YQOC_CAEEL Putative RNA-binding protein EEED8.12 OS=Ca...     53   7e-006

>sp|Q7XTT4|NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp. japonica
        GN=Os04g0620700 PE=2 SV=2

          Length = 707

 Score =  196 bits (498), Expect = 5e-049
 Identities = 114/296 (38%), Positives = 155/296 (52%), Gaps = 11/296 (3%)
 Frame = -1

Query: 1058 KKNTDVEMVDAPSAKK----APQTPAT--PQATGSKTIFMGNLSFSIEENDIVNFFKDVG 897
            KK T V +    SA K     P+TPA+   QATGSKT+F+GNL +++E+  +  FF++ G
Sbjct:  414 KKETAVSVGSNKSATKPGQEEPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAG 473

Query:  896 EVAEVRFA-MRDERFAGYGHVEFTTPDAAQKALELNGSDLLGRDVKIDLAKERGERGSYT 720
            EV ++RF+   D  F G+GHVEF T +AA+KALEL G DL+GR V++DLA+   ERG+YT
Sbjct:  474 EVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLAR---ERGAYT 530

Query:  719 PG-GNDXXXXXXXXXXXXXXXXXXXXXADDDFDSLRATLEGHFGGCGEISRLAIPKDYDT 543
            PG G D                        D   +R +LE HFG CGEI+R++IPKDY+T
Sbjct:  531 PGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYET 590

Query:  542 GAPKGIAFIDFADSNGFNKALELNGTEVGGGYITVSESKPXXXXXXXXXXXXXXXXXXXX 363
            GA KG+A++DFAD+   +KA ELNG+++GG  + V E++P                    
Sbjct:  591 GASKGMAYMDFADNGSLSKAYELNGSDLGGYSLYVDEARPRPDNNREGGFSGGRDFNSSG 650

Query:  362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRPSMAQPGTGKKTTFGDD 195
                                                P + S   P  GKKTTFGDD
Sbjct:  651 RGGRRGGRGDGSRGRGDRGRGRGFGRGDRGHGGRGTPFKQSAGTPSAGKKTTFGDD 706

>sp|Q9FVQ1|NUCL1_ARATH Nucleolin 1 OS=Arabidopsis thaliana GN=NUCL1 PE=1 SV=1

          Length = 557

 Score =  191 bits (485), Expect = 2e-047
 Identities = 106/220 (48%), Positives = 144/220 (65%), Gaps = 13/220 (5%)
 Frame = -1

Query: 1058 KKNTDVEMVDA-PSAKKAPQTPATPQATGSKTIFMGNLSFSIEENDIVNFFKDVGEVAEV 882
            KK++DVEMVDA  S+ K P+TP+TP A GSKT+F  NLSF+IE  D+ NFFK+ GEV +V
Sbjct:  267 KKSSDVEMVDAEKSSAKQPKTPSTPAAGGSKTLFAANLSFNIERADVENFFKEAGEVVDV 326

Query:  881 RFAMR--DERFAGYGHVEFTTPDAAQKALELNGSDLLGRDVKIDLAKERGERG---SYTP 717
            RF+    D  F G+GHVEF + + AQKALE +G  LLGR++++D+A+ERGERG   ++TP
Sbjct:  327 RFSTNRDDGSFRGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQERGERGERPAFTP 386

Query:  716 -GGNDXXXXXXXXXXXXXXXXXXXXXADDDFDSLRATLEGHFGGCGEISRLAIPKDYDTG 540
              GN                      ++DD   ++ TL  HF  CGEI  +++P D DTG
Sbjct:  387 QSGNFRSGGDGGDEKKIFVKGFDASLSEDD---IKNTLREHFSSCGEIKNVSVPIDRDTG 443

Query:  539 APKGIAFIDFADSNGFNKALELNGTEVGGG-YITVSESKP 423
              KGIA+++F  S G  KALELNG+++GGG Y+ V E +P
Sbjct:  444 NSKGIAYLEF--SEGKEKALELNGSDMGGGFYLVVDEPRP 481

>sp|Q1PEP5|NUCL2_ARATH Nucleolin 2 OS=Arabidopsis thaliana GN=NUCL2 PE=2 SV=1

          Length = 636

 Score =  183 bits (464), Expect = 4e-045
 Identities = 98/215 (45%), Positives = 133/215 (61%), Gaps = 12/215 (5%)
 Frame = -1

Query: 1058 KKNTDVEMVDA--PSAKKAPQTPATPQATGSKTIFMGNLSFSIEENDIVNFFKDVGEVAE 885
            KK++DVEMVDA   S  K P+TP      GSKT+F GNLS+ I  +DI NFFK+ GEV +
Sbjct:  353 KKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVD 412

Query:  884 VRFAMRDE-RFAGYGHVEFTTPDAAQKALELNGSDLLGRDVKIDLAKERGERGSYTPGGN 708
            VR +  D+  F GYGH+EF +P+ AQKALE+NG  LLGRDV++DLA ERG   +  PG  
Sbjct:  413 VRLSSFDDGSFKGYGHIEFASPEEAQKALEMNGKLLLGRDVRLDLANERGTPRNSNPGRK 472

Query:  707 DXXXXXXXXXXXXXXXXXXXXXADDDFDSLRATLEGHFGGCGEISRLAIPKDYDTGAPKG 528
                                       D ++  L  HF  CGE++R+ +P D +TGA +G
Sbjct:  473 GEGSQSRTIYVRGFSSSLGE-------DEIKKELRSHFSKCGEVTRVHVPTDRETGASRG 525

Query:  527 IAFIDFADSNGFNKALELNGTEVGGGYITVSESKP 423
             A+ID   ++GF++AL+L+G+E+GGG I V ES+P
Sbjct:  526 FAYIDL--TSGFDEALQLSGSEIGGGNIHVEESRP 558

>sp|Q6Z1C0|NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp. japonica
        GN=Os08g0192900 PE=2 SV=1

          Length = 572

 Score =  170 bits (429), Expect = 5e-041
 Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 10/219 (4%)
 Frame = -1

Query: 1067 KTAKKNTDVEMVDAPSAKKAPQTPATPQATG--SKTIFMGNLSFSIEENDIVNFFKDVGE 894
            KT KK T        S    P+TPA+ Q+ G  S T+FMGNLSF++ ++ +  FF++VGE
Sbjct:  280 KTPKKKTPAA---TKSQNDEPKTPASNQSQGTESATLFMGNLSFNLNQDQVKEFFQEVGE 336

Query:  893 VAEVRFAMRDERFA-GYGHVEFTTPDAAQKALELNGSDLLGRDVKIDLAKERGERGSYTP 717
            V  VR A  ++  + G+GHV+F + + A+KALEL+G DL GR V++DLA    ERG+YTP
Sbjct:  337 VISVRLATHEDGSSRGFGHVQFASSEEAKKALELHGCDLDGRPVRLDLAH---ERGAYTP 393

Query:  716 -GGNDXXXXXXXXXXXXXXXXXXXXXADDDFDSLRATLEGHFGGCGEISRLAIPKDYDTG 540
               ND                     +  +   +R +LEGHF  CGEI+R+++P D +TG
Sbjct:  394 HSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESKIRESLEGHFADCGEITRVSVPMDRETG 453

Query:  539 APKGIAFIDFADSNGFNKALELNGTEVGGGYITVSESKP 423
            A KGIA+IDF D   F+KALEL+G+++GG  + V E+KP
Sbjct:  454 ASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAKP 492

>sp|P41891|GAR2_SCHPO Protein gar2 OS=Schizosaccharomyces pombe (strain 972 /
        ATCC 24843) GN=gar2 PE=1 SV=2

          Length = 500

 Score =  82 bits (200), Expect = 2e-014
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
 Frame = -1

Query: 1025 PSAKKAPQTPATPQATGSK--TIFMGNLSFSIEENDIVNFFKDVGEVAEVRFAM--RDER 858
            P++++ P     P    ++  T+F+G LS+++++  +   F++ G +   R  M  +  R
Sbjct:  243 PASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGR 302

Query:  857 FAGYGHVEFTTPDAAQKALELNGS-DLLGRDVKIDLAKERGERGSYTPGGNDXXXXXXXX 681
              GYG+V+F TP+AA+ A+  NG+ ++ GR V +DL+  R    +  P            
Sbjct:  303 SKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPR--PANPQPYAQQRAGNFGDQ 360

Query:  680 XXXXXXXXXXXXXADDDFDSLRATLEGHFGGCGEISRLAIPKDYDTGAPKGIAFIDFADS 501
                         +   F++    L   FGGCG+I  + +P D  +G  KG  ++ F+D 
Sbjct:  361 LSEPSDTVFVGNLS---FNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDI 417

Query:  500 NGFNKALELNGTEVGGGYITVSESKP 423
            +   K +E+NG  + G    +  S P
Sbjct:  418 DSAKKCVEMNGHFIAGRPCRLDFSTP 443

>sp|Q09295|YQO4_CAEEL Putative RNA-binding protein EEED8.4 OS=Caenorhabditis
        elegans GN=EEED8.4 PE=2 SV=2

          Length = 191

 Score =  53 bits (126), Expect = 7e-006
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = -1

Query: 632 DFDSLRATLEGHFGGCGEISRLAIPKDYDTGAPKGIAFIDFADSNGFNKALELNGT 465
           DF+S    +E HF GCG+I +  IPKD  T   K  A+I+F DS+    AL +NG+
Sbjct:  63 DFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGS 118

>sp|Q09301|YQOC_CAEEL Putative RNA-binding protein EEED8.12 OS=Caenorhabditis
        elegans GN=EEED8.12 PE=2 SV=1

          Length = 197

 Score =  53 bits (126), Expect = 7e-006
 Identities = 26/56 (46%), Positives = 33/56 (58%)
 Frame = -1

Query: 632 DFDSLRATLEGHFGGCGEISRLAIPKDYDTGAPKGIAFIDFADSNGFNKALELNGT 465
           DF+S    +E HF GCG I R  IPKD  T   K  A+I+F DS+    AL +NG+
Sbjct:  69 DFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGS 124

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,059,579,219
Number of Sequences: 537505
Number of Extensions: 13059579219
Number of Successful Extensions: 67545544
Number of sequences better than 0.0: 0